RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CHIAQ9BZP6 476 aa13.21□□□□□ -0.29
CAPN1-205ENST00000526954 LIN7CQ9NUP9 197 aaKnown RBP13.21□□□□□ -0.29
CAPN1-205ENST00000526954 FAM240BA0A1B0GVZ2 78 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 CRYM-AS1A6NIL9 109 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 B3GALNT1O75752 331 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 OR2F2O95006 317 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 TCRBP04435 133 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
CAPN1-205ENST00000526954 UBA52P62987 128 aaKnown RBP13.2□□□□□ -0.3
CAPN1-205ENST00000526954 CBX3Q13185 183 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 DCTN2Q13561 401 aaKnown RBP13.2□□□□□ -0.3
CAPN1-205ENST00000526954 HNF4GQ14541 408 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 SPAG16Q8N0X2 631 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 ADAD2Q8NCV1 583 aaKnown RBP13.2□□□□□ -0.3
CAPN1-205ENST00000526954 DUSP18Q8NEJ0 188 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 OR8H1Q8NGG4 311 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 OR4S2Q8NH73 311 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 OSR1Q8TAX0 266 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-205ENST00000526954 TMEM230Q96A57 120 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 RBMXL1Q96E39 390 aaKnown RBP13.2□□□□□ -0.3
CAPN1-205ENST00000526954 DUX5Q96PT3 197 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 RAB18Q9NP72 206 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 TNFRSF19Q9NS68 423 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 CUBNO60494 3623 aa13.2□□□□□ -0.3
CAPN1-205ENST00000526954 H0Y980 276 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 CRYZL1O95825 349 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 LGALS7P47929 136 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
CAPN1-205ENST00000526954 TMEM128Q5BJH2 165 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 OR2B11Q5JQS5 317 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 CENPSQ8N2Z9 138 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 NPBQ8NG41 125 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 RITA1Q96K30 269 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 NAA60Q9H7X0 242 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 PLSCR3Q9NRY6 295 aa13.19□□□□□ -0.3
CAPN1-205ENST00000526954 C3orf85A0A1B0GTC6 90 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 CHST1O43916 411 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 GPR137BO60478 399 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 RAMP3O60896 148 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 NDUFA3O95167 84 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 HPRT1P00492 218 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 F2RL1P55085 397 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 TAS2R31P59538 309 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 UBE2MP61081 183 aaKnown RBP13.18□□□□□ -0.3
CAPN1-205ENST00000526954 RPS16P62249 146 aaKnown RBP13.18□□□□□ -0.3
CAPN1-205ENST00000526954 DHODHQ02127 395 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 NRARPQ7Z6K4 114 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 SLC25A42Q86VD7 318 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
CAPN1-205ENST00000526954 C20orf85Q9H1P6 137 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 PLEKHA2Q9HB19 425 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 C1RLQ9NZP8 487 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 FLVCR2Q9UPI3 526 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 MOB4Q9Y3A3 225 aa13.18□□□□□ -0.3
CAPN1-205ENST00000526954 TEX13DA0A0J9YY54 714 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-205ENST00000526954 TRIM77I1YAP6 450 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 M0QZK8 103 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
CAPN1-205ENST00000526954 SHOXO15266 292 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 FGF16O43320 207 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 SPDEFO95238 335 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 AKR1C4P17516 323 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 C11orf88Q6PI97 169 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 HARBI1Q96MB7 349 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 TP53RKQ96S44 253 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 ALX4Q9H161 411 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-205ENST00000526954 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
CAPN1-205ENST00000526954 SRRM4A7MD48 611 aaKnown RBP13.16□□□□□ -0.3
CAPN1-205ENST00000526954 NBR2O15453 112 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 AMY1AP04745 511 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 RPA2P15927 270 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 UCP1P25874 307 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 CNTFRP26992 372 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 LPAR6P43657 344 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 MECP2P51608 486 aaKnown RBP13.16□□□□□ -0.3
CAPN1-205ENST00000526954 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
CAPN1-205ENST00000526954 MMDQ15546 238 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 Q8N9W7 124 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 ZFAND2BQ8WV99 257 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 AIFM2Q9BRQ8 373 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 NUDT15Q9NV35 164 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 KCNIP3Q9Y2W7 256 aa13.16□□□□□ -0.3
CAPN1-205ENST00000526954 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
CAPN1-205ENST00000526954 RRHO14718 337 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 PTTG1O95997 202 aa13.15□□□□□ -0.3
CAPN1-205ENST00000526954 HRASP01112 189 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms