RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 EDA2RQ9HAV5 297 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 SCPEP1Q9HB40 452 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 TPSG1Q9NRR2 321 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 C19orf73Q9NVV2 129 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 KCNIP1Q9NZI2 227 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 RNF150Q9ULK6 438 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 FOXA2Q9Y261 457 aaPredicted RBP5.05□□□□□ -1.6
CD44-221ENST00000526000 NUBP2Q9Y5Y2 271 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 TNCP24821 2201 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 A0A0A6YYD4 124 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 A0A0B4J203 849 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 SMIM30A4D0T7 59 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 H7C2Y5 167 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 MFNGO00587 321 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 RRHO14718 337 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 SOCS1O15524 211 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 RGS5O15539 181 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 TXNL1O43396 289 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 NAPSAO96009 420 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 HLA-DRB1P01911 266 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 TRGV3P03979 118 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 LGALS1P09382 135 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 OR8U9P0C7N5 309 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 APELAP0DMC3 54 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 RPS16P62249 146 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 SSBP1Q04837 148 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 CDNFQ49AH0 187 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 ACTBL2Q562R1 376 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 TMEM69Q5SWH9 247 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 HACD4Q5VWC8 232 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 ZNF880Q6PDB4 577 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 C8orf31Q8N9H6 132 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 DRAXINQ8NBI3 349 aaPredicted RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 OR5H6Q8NGV6 325 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 GRPEL2Q8TAA5 225 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 IL1F10Q8WWZ1 152 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 FLYWCH2Q96CP2 140 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 ARHGAP5-AS1Q96IT6 56 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 RHOVQ96L33 236 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 CMSS1Q9BQ75 279 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 NICN1Q9BSH3 213 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 DCUN1D5Q9BTE7 237 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 FAAP24Q9BTP7 215 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 ABHD14AQ9BUJ0 271 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 ELOVL1Q9BW60 279 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 PECRQ9BY49 303 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 C6orf62Q9GZU0 229 aaPredicted RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 PARP12Q9H0J9 701 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 C12orf4Q9NQ89 552 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 MBNL3Q9NUK0 354 aaKnown RBP5.04□□□□□ -1.6
CD44-221ENST00000526000 PTTG2Q9NZH5 202 aa5.04□□□□□ -1.6
CD44-221ENST00000526000 TRAV18A0A075B6X5 111 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 SAA2-SAA4A0A096LPE2 208 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 IZUMO1RA6ND01 250 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 FAM25AB3EWG3 89 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 FAM25CB3EWG5 89 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 FAM25GB3EWG6 89 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 CTDSPLO15194 276 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 HPGDSO60760 199 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 IFNA6P05013 189 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 CTXN2P0C2S0 81 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 SAA2P0DJI9 122 aaPredicted RBP5.03□□□□□ -1.6
CD44-221ENST00000526000 CT45A6P0DMU7 189 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 CT45A5P0DMU8 189 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 CT45A7P0DMV0 189 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 PRSS3P35030 304 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 ETV6P41212 452 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 ZNF137PP52743 207 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 SYNJ2BPP57105 145 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 TAS2R20P59543 309 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 GNG2P59768 71 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 TMEM267Q0VDI3 215 aaPredicted RBP5.03□□□□□ -1.6
CD44-221ENST00000526000 ARFRP1Q13795 201 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 PLAC9Q5JTB6 97 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 SPANXN2Q5MJ10 180 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 LY6G6FQ5SQ64 297 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 STEAP3Q658P3 488 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 ZNF660Q6AZW8 331 aaPredicted RBP5.03□□□□□ -1.6
CD44-221ENST00000526000 PYHIN1Q6K0P9 492 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 C6orf201Q7Z4U5 140 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 NPBQ8NG41 125 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 MRPL30Q8TCC3 161 aaKnown RBP5.03□□□□□ -1.6
CD44-221ENST00000526000 DEDD2Q8WXF8 326 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 DIRAS2Q96HU8 199 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 SULT4A1Q9BR01 284 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 SPATA25Q9BR10 227 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 KCNK15Q9H427 330 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 AUNIPQ9H7T9 357 aa5.03□□□□□ -1.6
CD44-221ENST00000526000 CHMP1AQ9HD42 196 aaPredicted RBP5.03□□□□□ -1.6
CD44-221ENST00000526000 METTL1Q9UBP6 276 aaKnown RBP5.03□□□□□ -1.6
CD44-221ENST00000526000 BIRC6Q9NR09 4857 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 C13orf42A0A1B0GVH6 325 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 CTDSP2O14595 271 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 ITGB1BP1O14713 200 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 HSPA12AO43301 675 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 YPEL1O60688 119 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 JTBO76095 146 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 RGS11O94810 467 aa5.02□□□□□ -1.61
CD44-221ENST00000526000 NDUFA3O95167 84 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms