RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 NTN1O95631 604 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 TMEM171Q8WVE6 324 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 NABP2Q9BQ15 211 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 NPIPB4C9JG80 1138 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 H7C1H1 209 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 PRTN3P24158 256 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 LSM6P62312 80 aaKnown RBP11.81□□□□□ -0.52
LRRK1-202ENST00000525284 CENPWQ5EE01 88 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 OR51G1Q8NGK1 321 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 LINC00615Q96LM1 132 aaPredicted RBP11.81□□□□□ -0.52
LRRK1-202ENST00000525284 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 CNTRLQ7Z7A1 2325 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 C1orf122Q6ZSJ8 110 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF645Q8N7E2 425 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 FGF5P12034 268 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 ALX4Q9H161 411 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-202ENST00000525284 GSN-AS1Q9NRJ2 163 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF257Q9Y2Q1 563 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 A0A0U1RRA0 63 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-202ENST00000525284 P2RY4P51582 365 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 WDR82Q6UXN9 313 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 KNTC1P50748 2209 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 H0Y980 276 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 PF4P02776 101 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 LHX8Q68G74 356 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF660Q6AZW8 331 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-202ENST00000525284 SPTY2D1-AS1A0A0U1RR47 76 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 ZNHIT1O43257 154 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 CA11O75493 328 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 CT62P0C5K7 136 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 NPPCP23582 126 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 ACSF3Q4G176 576 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-202ENST00000525284 ASIPP42127 132 aa11.8□□□□□ -0.52
LRRK1-202ENST00000525284 PEAR1Q5VY43 1037 aaPredicted RBP11.8□□□□□ -0.52
LRRK1-202ENST00000525284 PEX7O00628 323 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 CD300LDQ6UXZ3 194 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 GPHA2Q96T91 129 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 LIPT2A6NK58 231 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 A8MWV9 139 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 SCTP09683 121 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 MC5RP33032 325 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 DCAF10Q5QP82 559 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 BRWD1Q9NSI6 2320 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 HBDP02042 147 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 ADRA2AP08913 450 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 PMS2CLQ68D20 193 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 TNFRSF14Q92956 283 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 VKORC1Q9BQB6 163 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 DCTN5Q9BTE1 182 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3-23P01764 117 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 TSPAN7P41732 249 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF585BQ52M93 769 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 OR10J3Q5JRS4 329 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 MRPS18BQ9Y676 258 aaKnown RBP11.79□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3-49A0A0A0MS15 119 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 TCRBV5S1A1TA0A578 114 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 LEPP41159 167 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 PGFP49763 221 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 CHST5Q9GZS9 411 aa11.79□□□□□ -0.52
LRRK1-202ENST00000525284 TRAV30A0A087WSZ9 112 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.78□□□□□ -0.52
LRRK1-202ENST00000525284 ZG16O60844 167 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 ECM29Q5VYK3 1845 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 TRBV5-4A0A0C4DH59 114 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 FHITP49789 147 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 ITLN2Q8WWU7 325 aaPredicted RBP11.78□□□□□ -0.52
LRRK1-202ENST00000525284 ASCC3Q8N3C0 2202 aaKnown RBP11.78□□□□□ -0.52
LRRK1-202ENST00000525284 CACNA1CQ13936 2221 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 FAM71F2Q6NXP2 309 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 UCN2Q96RP3 112 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 TMEM222Q9H0R3 208 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 CRPP02741 224 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 SRFP11831 508 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 SF3B5Q9BWJ5 86 aaKnown RBP11.78□□□□□ -0.52
LRRK1-202ENST00000525284 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
LRRK1-202ENST00000525284 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.52
LRRK1-202ENST00000525284 ICAM4Q14773 271 aa11.77□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF658BQ4V348 819 aaPredicted RBP11.77□□□□□ -0.52
LRRK1-202ENST00000525284 CYSLTR1Q9Y271 337 aa11.77□□□□□ -0.52
LRRK1-202ENST00000525284 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.52
LRRK1-202ENST00000525284 TNFRSF6BO95407 300 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 MOSP00540 346 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 ZNF79Q15937 498 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 FGFRL1Q8N441 504 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 MYEOVQ96EZ4 313 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.53
LRRK1-202ENST00000525284 COX6B1P14854 86 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 STARD6P59095 220 aa11.77□□□□□ -0.53
LRRK1-202ENST00000525284 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms