RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ARFRP1Q13795 201 aa8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 SRSF7Q16629 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 ZNF660Q6AZW8 331 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 OR8U1Q8NH10 309 aa8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 GRPEL2Q8TAA5 225 aa8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 MCRIP2Q9BUT9 160 aaKnown RBP8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 GAB2Q9UQC2 676 aa8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 FBXO7Q9Y3I1 522 aa8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 A3GALT2U3KPV4 340 aa8.72□□□□□ -1.01
TRAPPC4-204ENST00000524797 M0R1X1 148 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 FCN1O00602 326 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 CRYZL1O95825 349 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 HOXD3P31249 432 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 TALDO1P37837 337 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 LINC00205P59089 165 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 EGFEM1PQ0D2K5 195 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 KIAA0141Q14154 515 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 CDK10Q15131 360 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 PSG5Q15238 335 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 C19orf54Q5BKX5 351 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 Q6ZS49 121 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR10J5Q8NHC4 309 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 C4orf3Q8WVX3 66 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 KLK15Q9H2R5 256 aa8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 ELF5Q9UKW6 265 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-204ENST00000524797 IGKV1D-8A0A087WSZ0 117 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 CENPXA8MT69 81 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 FAM25AB3EWG3 89 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 FAM25CB3EWG5 89 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 FAM25GB3EWG6 89 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 K7EIL1 84 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 APOA2P02652 100 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 CLEC2LP0C7M8 214 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR8U9P0C7N5 309 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SNRPBP14678 240 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SDC2P34741 201 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 RAB25P57735 213 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 NCS1P62166 190 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 CX3CL1P78423 397 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 PLGLAQ15195 96 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 ZFP69Q49AA0 526 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 CDNFQ49AH0 187 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SFXN4Q6P4A7 337 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 PDPNQ86YL7 162 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 ZNF491Q8N8L2 437 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 LGALS14Q8TCE9 139 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 DPF1Q92782 380 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 C5orf30Q96GV9 206 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 TSNAXQ99598 290 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR2D2Q9H210 308 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SLA2Q9H6Q3 261 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 RNF167Q9H6Y7 350 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 GNB4Q9HAV0 340 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 METTL1Q9UBP6 276 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 WI2-2373I1.2A0A1W2PRP0 233 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SPDEFO95238 335 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 DTYMKP23919 212 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 RPS16P62249 146 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 ECSCRQ19T08 205 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 TMEM65Q6PI78 240 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 H1FOOQ8IZA3 346 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 CLCC1Q96S66 551 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SLC35D1Q9NTN3 355 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 SDHAF2Q9NX18 166 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 VSIG4Q9Y279 399 aa8.7□□□□□ -1.02
TRAPPC4-204ENST00000524797 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 CD36P16671 472 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 CBX5P45973 191 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 MXD1Q05195 221 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 FHL3Q13643 280 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR5M8Q8NGP6 311 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR6F1Q8NGZ6 308 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 ABHD5Q8WTS1 349 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 UBE2E2Q96LR5 201 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 GINS4Q9BRT9 223 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 DCSTAMPQ9H295 470 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 NUBP2Q9Y5Y2 271 aa8.69□□□□□ -1.02
TRAPPC4-204ENST00000524797 LOC100506127A0A0U1RQW1 187 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 SOX15O60248 233 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 CA2P00918 260 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 SPNP16150 400 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 RAB9AP51151 201 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 RUNX1Q01196 453 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 ZNF260Q3ZCT1 412 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 HACD4Q5VWC8 232 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 PPP1R27Q86WC6 154 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 OR5H6Q8NGV6 325 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 FLYWCH2Q96CP2 140 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 C6orf62Q9GZU0 229 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 TPSG1Q9NRR2 321 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 A0A1W2PN81 502 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 TMEM235A6NFC5 223 aa8.68□□□□□ -1.02
TRAPPC4-204ENST00000524797 I3L521 148 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms