RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 TMEM249Q2WGJ8 235 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 PRAMEF5Q5TYX0 476 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 VWA1Q6PCB0 445 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 TMEM183AQ8IXX5 376 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 C1orf174Q8IYL3 243 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 DEFB123Q8N688 67 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 ZNF383Q8NA42 475 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 OR4X1Q8NH49 305 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 PPP1R35Q8TAP8 253 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 ABHD5Q8WTS1 349 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 RAB1CQ92928 201 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 SARAFQ96BY9 339 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 ANAPC16Q96DE5 110 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 SNX22Q96L94 193 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 QTRT1Q9BXR0 403 aaKnown RBP7.43□□□□□ -1.22
PKP3-202ENST00000524646 GPR61Q9BZJ8 451 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 UFSP2Q9NUQ7 469 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 OR6C3Q9NZP0 311 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 PITPNC1Q9UKF7 332 aa7.43□□□□□ -1.22
PKP3-202ENST00000524646 FAM186AA6NE01 2351 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 TRBV23-1A0A0A0MS06 115 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 TRAV17A0A0B4J275 112 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 IGHV1-18A0A0C4DH31 117 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 SRRM5B3KS81 715 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 F6UZH7 168 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 HMGB3O15347 200 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 PAGE4O60829 102 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 GGCTO75223 188 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 RBMXL2O75526 392 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 TYMSP04818 313 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 CD55P08174 381 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 DUTP33316 252 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 SRP14P37108 136 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 FAM3BP58499 235 aaPredicted RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 SPCS3P61009 180 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 ERVK-16P61578 105 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 RPP30P78346 268 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 EDDM3AQ14507 147 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 HNF4GQ14541 408 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 PDLIM3Q53GG5 364 aaPredicted RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 SPINK9Q5DT21 86 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 COA6Q5JTJ3 125 aaKnown RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 CDPF1Q6NVV7 123 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 IGFL2Q6UWQ7 119 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 BHLHA15Q7RTS1 189 aaPredicted RBP7.42□□□□□ -1.22
PKP3-202ENST00000524646 GCSAMQ8N6F7 178 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 CD177Q8N6Q3 437 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 Q8N7P7 452 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 FAM169BQ8N8A8 192 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 OR52E5Q8NH55 327 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 Q8TCH9 128 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 GATAD1Q8WUU5 269 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 MSL2Q9HCI7 577 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 WDR87Q6ZQQ6 2873 aa7.42□□□□□ -1.22
PKP3-202ENST00000524646 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 DSCAMO60469 2012 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 TRGV8A0A0C4DH27 118 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 C11orf94C9JXX5 98 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 PPP5D1E7EU14 171 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 M0R1X1 148 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 F2RL2O00254 374 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 MGST3O14880 152 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 TMPRSS2O15393 492 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 PDE6DO43924 150 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 YPEL1O60688 119 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 FCGR3BO75015 233 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 HPRT1P00492 218 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 CD99P14209 185 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 FABP4P15090 132 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 HIST1H1BP16401 226 aaKnown RBP7.41□□□□□ -1.22
PKP3-202ENST00000524646 OPRK1P41145 380 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 VDAC2P45880 294 aaPredicted RBP7.41□□□□□ -1.22
PKP3-202ENST00000524646 RPS16P62249 146 aaKnown RBP7.41□□□□□ -1.22
PKP3-202ENST00000524646 HOXA4Q00056 320 aaPredicted RBP7.41□□□□□ -1.22
PKP3-202ENST00000524646 TLE1Q04724 770 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 FOXF2Q12947 444 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 C4orf17Q53FE4 359 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 ACTL10Q5JWF8 245 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 KCNIP4Q6PIL6 250 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 TPRX1Q8N7U7 411 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 NECAP1Q8NC96 275 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 OR51G1Q8NGK1 321 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 OR1P1Q8NH06 330 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 OR5R1Q8NH85 324 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 TMEM170AQ8WVE7 144 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 PACRGQ96M98 296 aaPredicted RBP7.41□□□□□ -1.22
PKP3-202ENST00000524646 YPEL2Q96QA6 119 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 HIST1H2BLQ99880 126 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 DCTN5Q9BTE1 182 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 ELOVL1Q9BW60 279 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 IFI27L2Q9H2X8 130 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 PRDM13Q9H4Q3 707 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 CHODLQ9H9P2 273 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 RAB9BQ9NP90 201 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 GNG12Q9UBI6 72 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 FZR1Q9UM11 496 aa7.41□□□□□ -1.22
PKP3-202ENST00000524646 PROCRQ9UNN8 238 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms