RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	MPI	P34949	423 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	RCVRN	P35243	200 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	LGALS7	P47929	136 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TAS2R46	P59540	309 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	PPP1CA	P62136	330 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	SNRPF	P62306	86 aa	Known RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	CD47	Q08722	323 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZFP69	Q49AA0	526 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TMEM255A	Q5JRV8	349 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TEX30	Q5JUR7	227 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TMEM236	Q5W0B7	351 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR10K2	Q6IF99	312 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	FBXW12	Q6X9E4	464 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	DGAT2L6	Q6ZPD8	337 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OLIG3	Q7RTU3	272 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	GLT6D1	Q7Z4J2	308 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	CADM2	Q8N3J6	435 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF676	Q8N7Q3	588 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	DCAF4L2	Q8NA75	395 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR11H1	Q8NG94	326 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR11H7	Q8NGC8	314 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR11H2	Q8NH07	326 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR52N1	Q8NH53	320 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR1S1	Q8NH92	325 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	MAFIP	Q8WZ33	124 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZHX1-C8orf76	Q96EF9	292 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	OR5M11	Q96RB7	305 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	F2RL3	Q96RI0	385 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ARHGDIG	Q99819	225 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	EBF4	Q9BQW3	602 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	MRO	Q9BYG7	248 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ULBP3	Q9BZM4	244 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	TXNIP	Q9H3M7	391 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	NMNAT1	Q9HAN9	279 aa	Predicted RBP	3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	GNB4	Q9HAV0	340 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	LHX9	Q9NQ69	397 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	PARVA	Q9NVD7	372 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF226	Q9NYT6	803 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	DKKL1	Q9UK85	242 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	SIGLEC7	Q9Y286	467 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	FLVCR1	Q9Y5Y0	555 aa		3.13	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF106	Q9H2Y7	1883 aa	Known RBP	3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	IGLV3-10	A0A075B6K4	115 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	SMIM26	A0A096LP01	95 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	TRAV8-2	A0A0B4J237	113 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	IGKV1-8	A0A0C4DH67	115 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356		A0A0J9YXV3	536 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356		A0A0U1RQV1	116 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	TEX50	A0A1B0GTY4	177 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	OR6C6	A6NF89	314 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	BTNL10	A8MVZ5	291 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	ATP6V1G2-DDX39B	F2Z307	99 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356		H3BQF6	201 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356		M0QYV0	167 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC31A2	O15432	143 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	NDUFS5	O43920	106 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	DHRS3	O75911	302 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	CHTF8	P0CG12	524 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	PGAM2	P15259	253 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	KLK2	P20151	261 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	CRABP1	P29762	137 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC6A1	P30531	599 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	PSMB2	P49721	201 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	ERF	P50548	548 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	P2RX1	P51575	399 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	P2RY4	P51582	365 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	TAS2R41	P59536	307 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	GNG2	P59768	71 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	RAB5B	P61020	215 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	GNA12	Q03113	381 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	IHH	Q14623	411 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	ARHGAP11B	Q3KRB8	267 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	TRMT12	Q53H54	448 aa	Known RBP	3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	ACSBG2	Q5FVE4	666 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	FAM182A	Q5T1J6	154 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	FAM162B	Q5T6X4	162 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	HES5	Q5TA89	166 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	OTP	Q5XKR4	325 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	DNAJC24	Q6P3W2	148 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	C2orf66	Q6UXQ4	117 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356		Q6ZS92	163 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	TMEM86B	Q8N661	226 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF614	Q8N883	585 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	ST6GALNAC3	Q8NDV1	305 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	OR1L8	Q8NGR8	309 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	OR2G3	Q8NGZ4	309 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	COQ8A	Q8NI60	647 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	KCTD4	Q8WVF5	259 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	UCN3	Q969E3	161 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	TAMM41	Q96BW9	452 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	VSIG2	Q96IQ7	327 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	QKI	Q96PU8	341 aa	Known RBP eCLIP	3.12	□□□□□ -1.91	2e-14	■■■■□ 26.5
PCM1-223	ENST00000524356	NRTN	Q99748	197 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	MED18	Q9BUE0	208 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	C19orf24	Q9BVV8	132 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	VCX	Q9H320	206 aa		3.12	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms