RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 DUSP18Q8NEJ0 188 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 OR1N2Q8NGR9 330 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 OR13C9Q8NGT0 318 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 LGALS14Q8TCE9 139 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 GLMPQ8WWB7 406 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 DLX4Q92988 240 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-210ENST00000522843 TM2D1Q9BX74 207 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 HIPK2Q9H2X6 1198 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 SEBOXQ9HB31 216 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF286AQ9HBT8 521 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 RHBDL2Q9NX52 303 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 EXTL2Q9UBQ6 330 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 OR14J1Q9UGF5 321 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 SLC7A11Q9UPY5 501 aa5.05□□□□□ -1.6
SDCBP-210ENST00000522843 IGKV1-27A0A075B6S5 117 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 A0A0B4J203 849 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 A0A1W2PPI3 338 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A10PA6NDY2 464 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 A6NIN4 97 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A7PA6NKC0 464 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 OR5B21A6NL26 309 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 FAM90A23PA8MXZ1 464 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 LEUTXA8MZ59 168 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 FAM25AB3EWG3 89 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 FAM25CB3EWG5 89 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 FAM25GB3EWG6 89 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 F8VVB4 439 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 F8VWA3 439 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 BUB1B-PAK6H3BSN5 160 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 GABARAPH6UMI1 98 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 PLA2G10O15496 165 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 NOS1APO75052 506 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-210ENST00000522843 IGHG4P01861 327 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 OR8U8P0C7N1 319 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 IL7P13232 177 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 MPZP25189 248 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ATP1B3P54709 279 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 MTCP1P56278 107 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 CLDN12P56749 244 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ERVK11-1P61568 191 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 GNG3P63215 75 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 RPP30P78346 268 aaKnown RBP5.04□□□□□ -1.6
SDCBP-210ENST00000522843 RUNX1Q01196 453 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 MEF2CQ06413 473 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-210ENST00000522843 PDZK1IP1Q13113 114 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 UNC119Q13432 240 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ASAH1Q13510 395 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 HNF4GQ14541 408 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ARL6IP1Q15041 203 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 P2RY14Q15391 338 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 RGS21Q2M5E4 152 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 HLA-DRB5Q30154 266 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 NHLRC3Q5JS37 347 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ACSM6Q6P461 480 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 LINC00322Q6ZN03 302 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-210ENST00000522843 COMMD2Q86X83 199 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 Q8N402 240 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 JAGN1Q8N5M9 183 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 OR52L2PQ8NGH6 319 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 OR56B4Q8NH76 319 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 SMIM4Q8WVI0 70 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 RNF125Q96EQ8 232 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 OR5B12Q96R08 314 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 C7orf50Q9BRJ6 194 aaKnown RBP5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ST6GALNAC5Q9BVH7 336 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 PKIBQ9C010 78 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 ALX4Q9H161 411 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-210ENST00000522843 LPAR5Q9H1C0 372 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 DNAH5Q8TE73 4624 aa5.04□□□□□ -1.6
SDCBP-210ENST00000522843 PGPEP1LA6NFU8 196 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ORC5O43913 435 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 KDM4BO94953 1096 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 PTTG1O95997 202 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 GLAP06280 429 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 FAM106CPP0CH98 169 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 TMEM11P17152 192 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 CDK2P24941 298 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 DUSP1P28562 367 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 CD34P28906 385 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ARL3P36405 182 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 TMEM50BP56557 158 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 DEFA1P59665 94 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 DEFA3P59666 94 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
SDCBP-210ENST00000522843 EWSR1Q01844 656 aaKnown RBP eCLIP5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF616Q08AN1 781 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 IL18Q14116 193 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 EDDM3AQ14507 147 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 PYDC2Q56P42 97 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 GLIPR1L1Q6UWM5 242 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 MOB3CQ70IA8 216 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 GDPD3Q7L5L3 318 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF573Q86YE8 665 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 FOXRED2Q8IWF2 684 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 SGPP2Q8IWX5 399 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 OR8H2Q8N162 312 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ZNF491Q8N8L2 437 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ASCC1Q8N9N2 400 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms