RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 CEACAM19Q7Z692 300 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 IL17DQ8TAD2 202 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 PECRQ9BY49 303 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 AKIP1Q9NQ31 210 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 HSF4Q9ULV5 492 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 SELENOKQ9Y6D0 94 aa11.51□□□□□ -0.57
TRAPPC9-213ENST00000522504 TPPPO94811 219 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 UCHL1P09936 223 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 RHOGP84095 191 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 PLA2G7Q13093 441 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 HSD17B12Q53GQ0 312 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 TMEM177Q53S58 311 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 IGSF11Q5DX21 431 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 RNLSQ5VYX0 342 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 IDO2Q6ZQW0 420 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 MS4A15Q8N5U1 240 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 BPIFB6Q8NFQ5 453 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR6M1Q8NGM8 313 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR2K2Q8NGT1 345 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 CMSS1Q9BQ75 279 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 SRD5A3Q9H8P0 318 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 PLCXD1Q9NUJ7 323 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 MGAT4AQ9UM21 535 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 KCNK7Q9Y2U2 307 aa11.5□□□□□ -0.57
TRAPPC9-213ENST00000522504 BET1O15155 118 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 SHOXO15266 292 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR9G9P0C7N8 305 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 CLDN12P56749 244 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 PRSS8Q16651 343 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 PHB2Q99623 299 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 RAB26Q9ULW5 256 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 DMRT1Q9Y5R6 373 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 VPS13DQ5THJ4 4388 aa11.49□□□□□ -0.57
TRAPPC9-213ENST00000522504 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 A0A0B4J203 849 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR11H12B2RN74 326 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 PPP5D1E7EU14 171 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 SLC17A2O00624 439 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 FABP7O15540 132 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 HLA-AP01891 365 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 TNXAQ16473 311 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 TMEM91Q6ZNR0 172 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 LAX1Q8IWV1 398 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 C8orf59Q8N0T1 100 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 OR4A4PQ8NGN8 299 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 SRSF12Q8WXF0 261 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 LINC00476Q8WZB0 136 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 DDB2Q92466 427 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 TMEM203Q969S6 136 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 WDR89Q96FK6 387 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 URM1Q9BTM9 101 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 ZC4H2Q9NQZ6 224 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 AK6Q9Y3D8 172 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-213ENST00000522504 PCLOQ9Y6V0 5065 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 TRBV6-7A0A0A0MS04 114 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 LINC00473A8K010 186 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 AIREO43918 545 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 GSTT2P0CG29 244 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 GSTT2BP0CG30 244 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 FOLR2P14207 255 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 UBE2KP61086 200 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 GUCA2BQ16661 112 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 MAFIPQ8WZ33 124 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 CABLES2Q9BTV7 478 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 Q9H521 79 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 PLGRKTQ9HBL7 147 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
TRAPPC9-213ENST00000522504 FAM223BA6NKX1 122 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 CRYZL1O95825 349 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 CDK1P06493 297 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 KIR2DS2P43631 304 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 SERPINB10P48595 397 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 TAGLNQ01995 201 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 RAB11BQ15907 218 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 TEX45Q8NA69 505 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 DYNLRB2Q8TF09 96 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 CACNG8Q8WXS5 425 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 CNBD2Q96M20 576 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 MND1Q9BWT6 205 aa11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 ZNF430Q9H8G1 570 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-213ENST00000522504 MPPED1O15442 326 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 OR2C1O95371 312 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 FCGR3AP08637 254 aa11.45□□□□□ -0.58
TRAPPC9-213ENST00000522504 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms