RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 H3BPC8 53 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 UBE2L6O14933 153 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 IGHV1-69P01742 117 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 GZMBP10144 247 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 S100A5P33763 92 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 REG1BP48304 166 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 TBPL1P62380 186 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 CTAG1AP78358 180 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 OR2F1Q13607 317 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 LGALS9BQ3B8N2 356 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 TMEM31Q5JXX7 168 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 LGALS9CQ6DKI2 356 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 KRT222Q8N1A0 295 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 OR4C16Q8NGL9 310 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 OR5C1Q8NGR4 320 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 OR2T27Q8NH04 317 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 OR11H2Q8NH07 326 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 GNPNAT1Q96EK6 184 aaPredicted RBP2.53□□□□□ -2
HMGB1P46-201ENST00000520062 TMEM222Q9H0R3 208 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 TUBA4BQ9H853 241 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 SHANK3Q9BYB0 1731 aa2.53□□□□□ -2
HMGB1P46-201ENST00000520062 SNAPC4Q5SXM2 1469 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 TMEM235A6NFC5 223 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 OR5K4A6NMS3 321 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 C9JCJ5 164 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 IFNA16P05015 189 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 CCL1P22362 96 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 CDKN2CP42773 168 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 SERPINB10P48595 397 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 RAP1GDS1P52306 607 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 C8orf74Q6P047 294 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 GPHB5Q86YW7 130 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 DAND5Q8N907 189 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 CNEP1R1Q8N9A8 125 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 C12orf43Q96C57 262 aaKnown RBP2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 IMP4Q96G21 291 aaKnown RBP2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 ANAPC10Q9UM13 185 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 KMT2EQ8IZD2 1858 aa2.52□□□□□ -2.01
HMGB1P46-201ENST00000520062 DSCAML1Q8TD84 2053 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 IGHV1-69-2A0A0G2JMI3 117 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 A0A1B0GV50 99 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 SDHAF1A6NFY7 115 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 OR4C45A6NMZ5 311 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 OR5G3P0C626 314 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 CD24P25063 80 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 BLVRBP30043 206 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 ZNF140P52738 457 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 RBM11P57052 281 aaKnown RBP2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 MEF2BQ02080 365 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 PRDX4Q13162 271 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 C1orf158Q8N1D5 194 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 DEFB125Q8N687 156 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 RNASE6Q93091 150 aaKnown RBP2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 VCX3BQ9H321 246 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 AK3Q9UIJ7 227 aa2.51□□□□□ -2.01
HMGB1P46-201ENST00000520062 OTOFQ9HC10 1997 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 A0A087WUU8 490 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 A0A0J9YX75 114 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 COX7A2LO14548 114 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 RPL27AP46776 148 aaKnown RBP2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 GABRA2P47869 451 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 GABRA4P48169 554 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 SULT1A1P50225 295 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 CDK9P50750 372 aaKnown RBP2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 TAS2R30P59541 319 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 TNFAIP6P98066 277 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 SAPCD1Q5SSQ6 148 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 ZNF767PQ75MW2 155 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 SPATA12Q7Z6I5 190 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 UMODL1-AS1Q8N2C9 162 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 SLC22A24Q8N4F4 322 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 CLDND2Q8NHS1 167 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 RPS4Y2Q8TD47 263 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 RAB2BQ8WUD1 216 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 PPP1R14BQ96C90 147 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 SFRP2Q96HF1 295 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 CCDC42Q96M95 316 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 ZNF471Q9BX82 626 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 GPR84Q9NQS5 396 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 PXMP4Q9Y6I8 212 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 MINOS1-NBL1R4GNA1 71 aa2.5□□□□□ -2.01
HMGB1P46-201ENST00000520062 RPP14O95059 124 aaKnown RBP2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 FAM228BP0C875 321 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 MAP2K4P45985 399 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 OMPP47874 163 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 XCL1P47992 114 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 GNA12Q03113 381 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 FABP9Q0Z7S8 132 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 FADDQ13158 208 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 FAM201AQ5SY85 155 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 C2orf91Q6ZV80 131 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 MIEN1Q9BRT3 115 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 TAAR3PQ9P1P4 343 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 CCL26Q9Y258 94 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 COQ4Q9Y3A0 265 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 FAM215AQ9Y5M1 114 aa2.49□□□□□ -2.01
HMGB1P46-201ENST00000520062 VPS37CA5D8V6 355 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms