RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 OR13A1Q8NGR1 328 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 CHPT1Q8WUD6 406 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 SMIM4Q8WVI0 70 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 RTN4IP1Q8WWV3 396 aaPredicted RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 MOB3AQ96BX8 217 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 NKX3-1Q99801 234 aaPredicted RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 NABP2Q9BQ15 211 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ABHD14AQ9BUJ0 271 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 MCRIP2Q9BUT9 160 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 WDR13Q9H1Z4 485 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 PPIL3Q9H2H8 161 aaKnown RBP2.26□□□□□ -2.05
MCF2-208ENST00000519895 IFI27L2Q9H2X8 130 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 FKBP11Q9NYL4 201 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 AK3Q9UIJ7 227 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 KIF25Q9UIL4 384 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ANXA10Q9UJ72 324 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 ZNF257Q9Y2Q1 563 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 OR2W1Q9Y3N9 320 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 N6AMT1Q9Y5N5 214 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 DNAH10Q8IVF4 4471 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
MCF2-208ENST00000519895 DNAJC9-AS1A6NH13 148 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 F8VVB4 439 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 F8VWA3 439 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 LYNX1G3V0Z9 82 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SDCBPO00560 298 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 MAGEB4O15481 346 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 MAS1P04201 325 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 LYNX1P0DP58 116 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 GABRR1P24046 479 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SOX2P48431 317 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PROK1P58294 105 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TAS2R19P59542 299 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 LCN2P80188 198 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 MRPS15P82914 257 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 PLAC9Q5JTB6 97 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 C22orf42Q6IC83 251 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 C11orf44Q8N8P7 122 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 DRAXINQ8NBI3 349 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 MINDY2Q8NBR6 621 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 WFDC9Q8NEX5 89 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 GALNT14Q96FL9 552 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SLIRPQ9GZT3 109 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR51B6Q9H340 312 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PLGRKTQ9HBL7 147 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TAF9BQ9HBM6 251 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ABCB10Q9NRK6 738 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 COPZ2Q9P299 210 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PEMTQ9UBM1 199 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 DAPK2Q9UIK4 370 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 RNF150Q9ULK6 438 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 MRPS7Q9Y2R9 242 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 PRELID3BQ9Y3B1 194 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 WASHC3Q9Y3C0 194 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ARID1AO14497 2285 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 IGHV1-3A0A0C4DH29 117 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 C5orf51A6NDU8 294 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 FAM90A26D6RGX4 464 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 FNDC10F2Z333 226 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 HSD17B6O14756 317 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ST8SIA3O43173 380 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 GPR137BO60478 399 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SNAPC5O75971 98 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR7C1O76099 320 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 CTSDP07339 412 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 SERPINA2P20848 420 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PRSS3P35030 304 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SAA4P35542 130 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 FAUP35544 74 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 TALDO1P37837 337 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 RPS19P39019 145 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 RFX2P48378 723 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TAS2R20P59543 309 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CATR1Q13166 79 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 DEFB112Q30KQ8 113 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 CDNFQ49AH0 187 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZNF585BQ52M93 769 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 NR2C2APQ86WQ0 139 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZCCHC24Q8N2G6 241 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 SIGLECL1Q8N7X8 197 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 C5orf56Q8N8D9 126 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ZNRF1Q8ND25 227 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TMEM167AQ8TBQ9 72 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TRMT10AQ8TBZ6 339 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 NPIPB3Q92617 1050 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 LSM10Q969L4 123 aaKnown RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 ARL11Q969Q4 196 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SEH1LQ96EE3 360 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 USMG5Q96IX5 58 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SLC25A21Q9BQT8 299 aaPredicted RBP2.25□□□□□ -2.05
MCF2-208ENST00000519895 OR51E2Q9H255 320 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SLA2Q9H6Q3 261 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PPP1R3EQ9H7J1 279 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 PLSCR3Q9NRY6 295 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TRAPPC2LQ9UL33 140 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 LRP1BQ9NZR2 4599 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 IGHV3OR15-7A0A075B7D8 119 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 TRAV2A0A0B4J234 112 aa2.25□□□□□ -2.05
MCF2-208ENST00000519895 ANKRD20A5PA0PJZ0 165 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms