RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 LINC00312Q9Y6C7 94 aa6.96□□□□□ -1.29
HMGB4-203ENST00000519684 SPENQ96T58 3664 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 A0A1W2PPE3 182 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 FAM74A7A6NL05 159 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 E7EQL1 145 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM178BH3BS89 294 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 ZG16O60844 167 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 F12P00748 615 aaPredicted RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 APOBEC3AP31941 199 aaPredicted RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 GNG10P50151 68 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 RPP30P78346 268 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 MRPS11P82912 194 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 MEF2CQ06413 473 aaPredicted RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 FAM74A3Q4VXF1 159 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 CT45A1Q5HYN5 189 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 SSX9Q7RTT3 188 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 OR10P1Q8NGE3 313 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 CT45A3Q8NHU0 189 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 SFT2D1Q8WV19 159 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 CCL17Q92583 94 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 RNASE6Q93091 150 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 RBMXL1Q96E39 390 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 RSG1Q9BU20 258 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM147Q9BVK8 224 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 QTRT1Q9BXR0 403 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 WDR61Q9GZS3 305 aaKnown RBP6.96□□□□□ -1.3
HMGB4-203ENST00000519684 SMDT1Q9H4I9 107 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM106BQ9NUM4 274 aa6.96□□□□□ -1.3
HMGB4-203ENST00000519684 SAA2-SAA4A0A096LPE2 208 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 FAM157AC9JC47 383 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 C9JQL5 133 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 PPIHO43447 177 aaKnown RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 NDUFB3O43676 98 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 PROP1O75360 226 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 OR9G9P0C7N8 305 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 SAA2P0DJI9 122 aaPredicted RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 NPBWR1P48145 328 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 OR2B8PP59922 312 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 SERF2P84101 59 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 LRRC10Q5BKY1 277 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 SPINK9Q5DT21 86 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 TCF23Q7RTU1 214 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 DMRTC2Q8IXT2 367 aaPredicted RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 OR10A7Q8NGE5 316 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 TAF15Q92804 592 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 ZDHHC16Q969W1 377 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 SLC35B3Q9H1N7 401 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 LINC00574Q9H8X3 128 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 KIAA1456Q9P272 454 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 RPUSD1Q9UJJ7 312 aaKnown RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 DSPP15924 2871 aaKnown RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 ANKRD11Q6UB99 2663 aaPredicted RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 DSCAMO60469 2012 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 B9A039 149 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 DAOP14920 347 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 SPCS3P61009 180 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 RPL31P62899 125 aaKnown RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 SPSB3Q6PJ21 355 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF439Q8NDP4 499 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 H1FXQ92522 213 aaKnown RBP6.95□□□□□ -1.3
HMGB4-203ENST00000519684 RAB39BQ96DA2 213 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 HIPK2Q9H2X6 1198 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 TIMM9Q9Y5J7 89 aa6.95□□□□□ -1.3
HMGB4-203ENST00000519684 MGAQ8IWI9 3026 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 CTAG1AP78358 180 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 EFNB3Q15768 340 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 FBXL19-AS1Q494R0 122 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM41BQ5BJD5 291 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 DHRS7BQ6IAN0 325 aaPredicted RBP6.94□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 OR52E5Q8NH55 327 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 DDB2Q92466 427 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 NEUROG1Q92886 237 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF714Q96N38 554 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 UNKLQ9H9P5 680 aaKnown RBP6.94□□□□□ -1.3
HMGB4-203ENST00000519684 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 DSCAML1Q8TD84 2053 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 APC2O95996 2303 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 BOD1L1Q8NFC6 3051 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 IGHV1-69-2A0A0G2JMI3 117 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 A6NJY4 79 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 HRASP01112 189 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 FGF7P21781 194 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 HOXA1P49639 335 aaPredicted RBP6.94□□□□□ -1.3
HMGB4-203ENST00000519684 ELLP55199 621 aaPredicted RBP6.94□□□□□ -1.3
HMGB4-203ENST00000519684 CCL20P78556 96 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 HAGHQ16775 308 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 RTL8BQ17RB0 113 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 AARDQ4LEZ3 155 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 AKIRIN2Q53H80 203 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 SLC25A48Q6ZT89 311 aaKnown RBP6.94□□□□□ -1.3
HMGB4-203ENST00000519684 VKORC1L1Q8N0U8 176 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 LINC01560Q8TB33 94 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 SCRT1Q9BWW7 348 aa6.94□□□□□ -1.3
HMGB4-203ENST00000519684 HEYLQ9NQ87 328 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms