RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TCF23Q7RTU1 214 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 TMEM25Q86YD3 366 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 GAPTQ8N292 157 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 ARHGAP18Q8N392 663 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 OR6K6Q8NGW6 343 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 TSNAXQ99598 290 aaKnown RBP1.08□□□□□ -2.24
SKP1-205ENST00000519054 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 GAL3ST2Q9H3Q3 398 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 OR5V1Q9UGF6 321 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 CCDC171Q6TFL3 1326 aa1.08□□□□□ -2.24
SKP1-205ENST00000519054 TRAV8-7A0A075B6U6 113 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 FAM240AA0A1B0GVK7 77 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 GSTTP1A0A1W2PQM5 241 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 TVP23AA6NH52 213 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 I3L4J1 428 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 SLC37A4O43826 429 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 CRTAPO75718 401 aaPredicted RBP1.07□□□□□ -2.24
SKP1-205ENST00000519054 HLA-AP01891 365 aaKnown RBP1.07□□□□□ -2.24
SKP1-205ENST00000519054 OPN1SWP03999 348 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 STAG3L2P0CL84 134 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 HTR2CP28335 458 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 ADORA1P30542 326 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 COILP38432 576 aaPredicted RBP1.07□□□□□ -2.24
SKP1-205ENST00000519054 CARD18P57730 90 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 TAS2R60P59551 318 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 ZNF404Q494X3 552 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 DUPD1Q68J44 220 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 DPPA2Q7Z7J5 298 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 CA13Q8N1Q1 262 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 OR52K1Q8NGK4 314 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 OR13C9Q8NGT0 318 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 OR2V1Q8NHB1 315 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 NDNFQ8TB73 568 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 NT5CQ8TCD5 201 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 FAM131CQ96AQ9 280 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 ZNF396Q96N95 335 aaPredicted RBP1.07□□□□□ -2.24
SKP1-205ENST00000519054 YPEL4Q96NS1 127 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 SHCBP1LQ9BZQ2 653 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 SLC7A11Q9UPY5 501 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 HS3ST2Q9Y278 367 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 PLIN4Q96Q06 1357 aa1.07□□□□□ -2.24
SKP1-205ENST00000519054 A0A096LNT2 108 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 H0YC42 278 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 RFXANKO14593 260 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 PRMT5O14744 637 aaPredicted RBP1.06□□□□□ -2.24
SKP1-205ENST00000519054 GATCO43716 136 aaKnown RBP1.06□□□□□ -2.24
SKP1-205ENST00000519054 CSTAP01040 98 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 CD8AP01732 235 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 ARL14EPLP0DKL9 152 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 GTF2F2P13984 249 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 ZNF140P52738 457 aaPredicted RBP1.06□□□□□ -2.24
SKP1-205ENST00000519054 TNXAQ16473 311 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 CEACAM16Q2WEN9 425 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 UBE2NLQ5JXB2 153 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 PID1Q7Z2X4 250 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 DOLPP1Q86YN1 238 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 SYS1Q8N2H4 156 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 ASCC1Q8N9N2 400 aaKnown RBP1.06□□□□□ -2.24
SKP1-205ENST00000519054 MITD1Q8WV92 249 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 C22orf15Q8WYQ4 148 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 PYURFQ96I23 114 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 QKIQ96PU8 341 aaKnown RBP eCLIP1.06□□□□□ -2.241e-8■■■■■ 29.1
SKP1-205ENST00000519054 TXNDC17Q9BRA2 123 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 DDA1Q9BW61 102 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 TM6SF2Q9BZW4 377 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 TSGA10Q9BZW7 698 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 METTL17Q9H7H0 456 aaPredicted RBP1.06□□□□□ -2.24
SKP1-205ENST00000519054 ANKHQ9HCJ1 492 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 C12orf4Q9NQ89 552 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 RBM12B-AS1Q9P1G2 102 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 CFL2Q9Y281 166 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 V9GYY9 64 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 MYOFQ9NZM1 2061 aa1.06□□□□□ -2.24
SKP1-205ENST00000519054 MYH8P13535 1937 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 SLC5A10A0PJK1 596 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 ARL5CA6NH57 179 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 SEC14L6B5MCN3 397 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 H7C2Y5 167 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 ZNF593O00488 134 aaPredicted RBP1.05□□□□□ -2.24
SKP1-205ENST00000519054 SC5DO75845 299 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 S1PR2O95136 353 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 TAC1P20366 129 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 ATP6AP1LQ52LC2 224 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 ACTL10Q5JWF8 245 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 NELFCDQ8IXH7 590 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 FAM58AQ8N1B3 248 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 OR5C1Q8NGR4 320 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 ZNF418Q8TF45 676 aaPredicted RBP1.05□□□□□ -2.24
SKP1-205ENST00000519054 CT55Q8WUE5 264 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 CCDC127Q96BQ5 260 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 CPB2Q96IY4 423 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 ADTRPQ96IZ2 230 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 NAP1L5Q96NT1 182 aaPredicted RBP1.05□□□□□ -2.24
SKP1-205ENST00000519054 OR2M4Q96R27 311 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 UTP23Q9BRU9 249 aaKnown RBP1.05□□□□□ -2.24
SKP1-205ENST00000519054 TTTY12Q9BZ98 90 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 SYT4Q9H2B2 425 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 TCEAL2Q9H3H9 227 aaPredicted RBP1.05□□□□□ -2.24
SKP1-205ENST00000519054 ACOT13Q9NPJ3 140 aa1.05□□□□□ -2.24
SKP1-205ENST00000519054 LZTFL1Q9NQ48 299 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms