RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 GOLPH3Q9H4A6 298 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 CLEC2DQ9UHP7 191 aa2.1□□□□□ -2.07
CPNE3-204ENST00000517862 V9GYY5 206 aaPredicted RBP2.1□□□□□ -2.07
CPNE3-204ENST00000517862 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.07
CPNE3-204ENST00000517862 TRAV8-7A0A075B6U6 113 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 TRAV39A0A0B4J263 110 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 OR51F1A6NGY5 319 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 ANKRD65E5RJM6 399 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 LINC01619G3V211 115 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 H3BNH8 94 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 PRMT5O14744 637 aaPredicted RBP2.09□□□□□ -2.07
CPNE3-204ENST00000517862 SOCS1O15524 211 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 SLC16A7O60669 478 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 VAPBO95292 243 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 C1QBP02746 253 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 CPMP14384 443 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 HPGDP15428 266 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 DYNLT3P51808 116 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 NDUFA8P51970 172 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF138P52744 262 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 TAS2R39P59534 338 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 REEP5Q00765 189 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 LRRC63Q05C16 580 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 IFFO1Q0D2I5 559 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 CIRBPQ14011 172 aaKnown RBP2.09□□□□□ -2.07
CPNE3-204ENST00000517862 DGCR6Q14129 220 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 KCNJ8Q15842 424 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 TAL2Q16559 108 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 ATP6V1FQ16864 119 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 KRTAP13-3Q3SY46 172 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 TTC32Q5I0X7 151 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 THEM4Q5T1C6 240 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 PLET1Q6UQ28 207 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF493Q6ZR52 646 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 SCXQ7RTU7 201 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 SPAG16Q8N0X2 631 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 CBR4Q8N4T8 237 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 C14orf178Q8N769 122 aaPredicted RBP2.09□□□□□ -2.07
CPNE3-204ENST00000517862 CHST4Q8NCG5 386 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 TTLQ8NG68 377 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 OR52R1Q8NGF1 315 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 MRGPRFQ96AM1 343 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 SGTBQ96EQ0 304 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 UBE2E2Q96LR5 201 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF75AQ96N20 296 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 AIF1LQ9BQI0 150 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 BCL2L14Q9BZR8 327 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 ARMC7Q9H6L4 198 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 MS4A12Q9NXJ0 267 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 MRM2Q9UI43 246 aaKnown RBP2.09□□□□□ -2.07
CPNE3-204ENST00000517862 KCNE3Q9Y6H6 103 aa2.09□□□□□ -2.07
CPNE3-204ENST00000517862 A0A087WTM6 91 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 IGHV3-64DA0A0J9YX35 117 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 TRPC5OSA6NMA1 111 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SYCE1LA8MT33 242 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 M0R1W7 72 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 PHOX2AO14813 284 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SLC31A2O15432 143 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 BCL2L11O43521 198 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SNAI2O43623 268 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SUPT3HO75486 399 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 HPRT1P00492 218 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 INSP01308 110 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 PNMA6AP0CW24 399 aaPredicted RBP2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SYT1P21579 422 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 GABRR1P24046 479 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 CD24P25063 80 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 F2RP25116 425 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 MSNP26038 577 aaKnown RBP2.08□□□□□ -2.08
CPNE3-204ENST00000517862 MIPP30301 263 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 CEACAM6P40199 344 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 HTR2BP41595 481 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 PPP1CBP62140 327 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 RPL31P62899 125 aaKnown RBP2.08□□□□□ -2.08
CPNE3-204ENST00000517862 RUNX1Q01196 453 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 CDK5R1Q15078 307 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 RGNQ15493 299 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 TTLL9Q3SXZ7 439 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 NCBP2-AS2Q69YL0 99 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 DCUN1D2Q6PH85 259 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 WDR82Q6UXN9 313 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 TMPRSS11AQ6ZMR5 421 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 TEX43Q6ZNM6 134 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 Q6ZVH6 145 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 CYB561A3Q8NBI2 242 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SUMF2Q8NBJ7 301 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 OR10W1Q8NGF6 305 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 OR51A7Q8NH64 312 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 ANGPTL6Q8NI99 470 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 CDKL2Q92772 493 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 MALSU1Q96EH3 234 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SNF8Q96H20 258 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 ZNF681Q96N22 645 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 AGMATQ9BSE5 352 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SLC25A37Q9NYZ2 338 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 CD300AQ9UGN4 299 aa2.08□□□□□ -2.08
CPNE3-204ENST00000517862 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 A0A0J9YXV3 536 aa2.07□□□□□ -2.08
CPNE3-204ENST00000517862 SMLR1H3BR10 107 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms