RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 H0Y8G0 127 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 DLEU1O43261 78 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 PFN1P07737 140 aaKnown RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 OR4A8P0C604 315 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 IGHV3-43DP0DP04 118 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CBLN1P23435 193 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ERHP84090 104 aaKnown RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 PCOLCEQ15113 449 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 MRPL54Q6P161 138 aaKnown RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 OR8I2Q8N0Y5 310 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 OR4S2Q8NH73 311 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 OR5P3Q8WZ94 311 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 KLK10O43240 276 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 COX7A2P2O60397 106 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 TNFSF13O75888 250 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 NAPSAO96009 420 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CELA2AP08217 269 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 LINC00614P0C842 121 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 SOX8P57073 446 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF718Q3SXZ3 478 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 DMRTA1Q5VZB9 504 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF324BQ6AW86 544 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 C19orf35Q6ZS72 473 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 MMD2Q8IY49 270 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF596Q8TC21 504 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 LIME1Q9H400 295 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CLEC1BQ9P126 229 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 NUP210Q8TEM1 1887 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 EP400Q96L91 3159 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 ZIC3O60481 467 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 SNRNP200O75643 2136 aaKnown RBP5.66□□□□□ -1.5
CPNE3-203ENST00000517490 SPINK2P20155 84 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 TNFSF10P50591 281 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 FOXL1Q12952 345 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 GABRA6Q16445 453 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 PRR27Q6MZM9 219 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 CXXC4Q9H2H0 198 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 IL36RNQ9UBH0 155 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 MPDZO75970 2070 aa5.66□□□□□ -1.5
CPNE3-203ENST00000517490 E9PLN8 166 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 S1PR2O95136 353 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 OR10J4P0C629 311 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 EGR1P18146 543 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 PRRX1P54821 245 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 C17orf82Q86X59 251 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-203ENST00000517490 SLC25A45Q8N413 288 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 SPSB4Q96A44 273 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 OPN3Q9H1Y3 402 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-203ENST00000517490 LAMTOR5O43504 91 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 GALR2O43603 387 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-203ENST00000517490 HBZP02008 142 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 CT45A6P0DMU7 189 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 CT45A5P0DMU8 189 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 CT45A7P0DMV0 189 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 NPY1RP25929 384 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 TDGF1P3P51864 188 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 TFF3Q07654 80 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 CT45A1Q5HYN5 189 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 CDPF1Q6NVV7 123 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 RPP25LQ8N5L8 163 aaKnown RBP5.65□□□□□ -1.5
CPNE3-203ENST00000517490 OR52L2PQ8NGH6 319 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 CT45A3Q8NHU0 189 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM45BQ96B21 275 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 ADTRPQ96IZ2 230 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 FER1L6-AS2Q96M78 137 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 COMMD5Q9GZQ3 224 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 TMEM191AQ9H0A3 160 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 SRCAPQ6ZRS2 3230 aa5.65□□□□□ -1.5
CPNE3-203ENST00000517490 TDRD6O60522 2096 aaKnown RBP5.65□□□□□ -1.5
CPNE3-203ENST00000517490 KIAA1549LQ6ZVL6 1849 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 ODAMA1E959 279 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 AMY1AP04745 511 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 GZMHP20718 246 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 MIC13Q5XKP0 118 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 CXorf67Q86X51 503 aaPredicted RBP5.65□□□□□ -1.51
CPNE3-203ENST00000517490 TMEM178AQ8NBL3 297 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 OR2D3Q8NGH3 330 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 LINC00470Q9BZP3 86 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 GSX1Q9H4S2 264 aaPredicted RBP5.65□□□□□ -1.51
CPNE3-203ENST00000517490 DNAJC4Q9NNZ3 241 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 FOXJ2Q9P0K8 574 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF581Q9P0T4 197 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 IGLV3-1P01715 115 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 ADMP35318 185 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 PTGDSP41222 190 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 ATP5G3P48201 142 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 KRTCAP3Q53RY4 240 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 ACSM6Q6P461 480 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 ZIC4Q8N9L1 334 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 OR1L1Q8NH94 360 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 SSC4DQ8WTU2 575 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 OR2V2Q96R30 315 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 DUSP13Q9UII6 198 aa5.65□□□□□ -1.51
CPNE3-203ENST00000517490 LRRK1Q38SD2 2015 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 C1QTNF9BB2RNN3 333 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SERF1AO75920 110 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TIAF1O95411 115 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 HINT1P49773 126 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms