RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TAF6P49848 677 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 LHX2P50458 406 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 NUDT2P50583 147 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 CMC4P56277 68 aaPredicted RBP2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 TBPL1P62380 186 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 LTC4SQ16873 150 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 WHAMMP3Q1A5X7 153 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 RNF212Q495C1 297 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 IL34Q6ZMJ4 242 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 LRP11Q86VZ4 500 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 RAB2BQ8WUD1 216 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 THEM6Q8WUY1 208 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 OR5P3Q8WZ94 311 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 PLEKHB2Q96CS7 222 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 ZNF414Q96IQ9 312 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 ZNF382Q96SR6 550 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 C11orf68Q9H3H3 251 aaKnown RBP2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 PDFQ9HBH1 243 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 GPR84Q9NQS5 396 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 TMEM38BQ9NVV0 291 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 FBXL12Q9NXK8 326 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 SCN2AQ99250 2005 aa2.8□□□□□ -1.96
RNU4-60P-201ENST00000517239 NUP210LQ5VU65 1888 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 PTPRJQ12913 1337 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 CCDC171Q6TFL3 1326 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TRAV4A0A0B4J268 109 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 IGHV5-10-1A0A0J9YXX1 117 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 A0A1B0GVX0 72 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 LINC00862A6NCI5 91 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 A8MWL6 223 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 SRRM5B3KS81 715 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 ATP6V1G2-DDX39BF2Z307 99 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 SOCS1O15524 211 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 IGLV3-27P01718 113 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 APCSP02743 223 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 IGHV4-34P06331 123 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 ADRA2AP08913 450 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 GIG44P09565 113 aaPredicted RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TLX1NBP0CAT3 122 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 CNTFRP26992 372 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 BLVRBP30043 206 aaPredicted RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 NUDT1P36639 197 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 PDGFRLQ15198 375 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 MMDQ15546 238 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 RNASE13Q5GAN3 156 aaKnown RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 GLT8D1Q68CQ7 371 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 MORN3Q6PF18 240 aaPredicted RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 AGTRAPQ6RW13 159 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TIFABQ6ZNK6 161 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 SLC22A24Q8N4F4 322 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 POM121L12Q8N7R1 296 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 ZNF615Q8N8J6 731 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 OR10G2Q8NGC3 310 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 OR13C8Q8NGS7 320 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 OR4A5Q8NH83 315 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 LINC01006Q8NI28 216 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 MRPL30Q8TCC3 161 aaKnown RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 LMX1AQ8TE12 382 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 RTN4IP1Q8WWV3 396 aaPredicted RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 FRZBQ92765 325 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 MAL2Q969L2 176 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 L3HYPDHQ96EM0 354 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 PDXPQ96GD0 296 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 IP6K3Q96PC2 410 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 OR2A5Q96R48 311 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 C2orf88Q9BSF0 95 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TSSK6Q9BXA6 273 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 WDR61Q9GZS3 305 aaKnown RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 PBOV1Q9GZY1 135 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TMEM126AQ9H061 195 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 CACYBPQ9HB71 228 aaKnown RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 HMG20AQ9NP66 347 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 SPANXCQ9NY87 97 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TAAR3PQ9P1P4 343 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 ZNF230Q9UIE0 474 aaPredicted RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 RPUSD1Q9UJJ7 312 aaKnown RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 HSPB8Q9UJY1 196 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 MRPS16Q9Y3D3 137 aaKnown RBP2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 UBR2Q8IWV8 1755 aa2.79□□□□□ -1.96
RNU4-60P-201ENST00000517239 TECPR2O15040 1411 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 CARMIL3Q8ND23 1372 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 TRBV20OR9-2A0A075B6H5 130 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 TRBV19A0A075B6N1 114 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 TRAV36DV7A0A075B6V5 113 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 A0A087WX48 190 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 IGHV3-49A0A0A0MS15 119 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 IGHV7-4-1A0A0J9YVY3 117 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 TMEM189A5PLL7 270 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 DPRXA6NFQ7 191 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 A8MUN3 132 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 J3QRK9 145 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 CYB5BO43169 146 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 FAM107AO95990 144 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 IGLV3-25P01717 112 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 C1QCP02747 245 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 HTR1AP08908 422 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 ZNF806P0C7X5 589 aa2.78□□□□□ -1.96
RNU4-60P-201ENST00000517239 UBBP0CG47 229 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms