RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 TMEM222Q9H0R3 208 aa0.69□□□□□ -2.3
CXXC4-203ENST00000515509 C8orf4Q9NR00 106 aa0.69□□□□□ -2.3
CXXC4-203ENST00000515509 TAAR3PQ9P1P4 343 aa0.69□□□□□ -2.3
CXXC4-203ENST00000515509 TP53TG1Q9Y2A0 90 aa0.69□□□□□ -2.3
CXXC4-203ENST00000515509 HDGFL3Q9Y3E1 203 aa0.69□□□□□ -2.3
CXXC4-203ENST00000515509 PCYT1BQ9Y5K3 369 aaPredicted RBP0.69□□□□□ -2.3
CXXC4-203ENST00000515509 SDK1Q7Z5N4 2213 aa0.69□□□□□ -2.3
CXXC4-203ENST00000515509 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 TMEM213A2RRL7 107 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 CCRL2O00421 344 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 TXNDC9O14530 226 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 NDUFS6O75380 124 aaKnown RBP0.68□□□□□ -2.3
CXXC4-203ENST00000515509 GPX2P18283 190 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 CXCL3P19876 107 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 CCR2P41597 374 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 CLDN12P56749 244 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 TBPL1P62380 186 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 HOXC5Q00444 222 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 FABP5Q01469 135 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 GNA13Q14344 377 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 DNAL1Q4LDG9 190 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 TMEM155Q4W5P6 130 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 OR1L8Q8NGR8 309 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 SLC37A2Q8TED4 501 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 Q96M85 177 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 NMNAT3Q96T66 252 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 NRBP2Q9NSY0 501 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 CHD5Q8TDI0 1954 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 A0A1W2PP64 1363 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 ABCC12Q96J65 1359 aa0.68□□□□□ -2.3
CXXC4-203ENST00000515509 TRBV6-5A0A0K0K1A5 114 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 C9JCJ5 164 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 FTCDNL1E5RQL4 147 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 ATP6V1G2O95670 118 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 ANGPT1Q15389 498 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 NNATQ16517 81 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 MIAQ16674 131 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 LYZL1Q6UWQ5 148 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 UNQ6190/PRO20217Q6UXQ8 127 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 KTN1-AS1Q86SY8 53 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 GPHB5Q86YW7 130 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 SYCE1Q8N0S2 351 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 ZNF675Q8TD23 568 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 SLC22A4Q9H015 551 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 NSRP1Q9H0G5 558 aaKnown RBP0.67□□□□□ -2.3
CXXC4-203ENST00000515509 ANGPT4Q9Y264 503 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 RBM7Q9Y580 266 aaKnown RBP0.67□□□□□ -2.3
CXXC4-203ENST00000515509 CCDC88CQ9P219 2028 aa0.67□□□□□ -2.3
CXXC4-203ENST00000515509 SYNRGQ9UMZ2 1314 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 DICER1Q9UPY3 1922 aaKnown RBP0.66□□□□□ -2.3
CXXC4-203ENST00000515509 TMED7-TICAM2A0A0A6YYA0 188 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 TEX50A0A1B0GTY4 177 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 TRPC5OSA6NMA1 111 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 HSBP1L1C9JCN9 74 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 F8W036 122 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 KLRC4O43908 158 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 STX10O60499 249 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 CIAO1O76071 339 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 SERPINA7P05543 415 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 CA5AP35218 305 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 RPS24P62847 133 aaKnown RBP0.66□□□□□ -2.3
CXXC4-203ENST00000515509 FKBP1AP62942 108 aaKnown RBP0.66□□□□□ -2.3
CXXC4-203ENST00000515509 EBPQ15125 230 aaKnown RBP0.66□□□□□ -2.3
CXXC4-203ENST00000515509 SPATA24Q86W54 205 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 OR13C8Q8NGS7 320 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 SLC7A6Q92536 515 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 DOHHQ9BU89 302 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 MS4A6AQ9H2W1 248 aa0.66□□□□□ -2.3
CXXC4-203ENST00000515509 SOX21Q9Y651 276 aaPredicted RBP0.66□□□□□ -2.3
CXXC4-203ENST00000515509 IGKV2-40A0A087WW87 121 aaPredicted RBP0.65□□□□□ -2.31
CXXC4-203ENST00000515509 MEIKINA0A087WXM9 373 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 IGHV1-18A0A0C4DH31 117 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 IGKV3D-7A0A0C4DH55 119 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 IGKV3OR2-268A0A0C4DH90 116 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 C5orf49A4QMS7 147 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 PLA2G10O15496 165 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 IGKV2D-40P01614 121 aaPredicted RBP0.65□□□□□ -2.31
CXXC4-203ENST00000515509 IL6P05231 212 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 HLA-DQB2P05538 268 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 CD79BP40259 229 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 AKR1C3P42330 323 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 FXYD7P58549 80 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 TAS2R20P59543 309 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 TPI1P60174 286 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 HLA-DRB3P79483 266 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 PLPPR5Q32ZL2 321 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 SLC36A2Q495M3 483 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 DNM1P34Q6PK57 102 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 FP248Q71RG6 208 aaPredicted RBP0.65□□□□□ -2.31
CXXC4-203ENST00000515509 FAM19A5Q7Z5A7 132 aaPredicted RBP0.65□□□□□ -2.31
CXXC4-203ENST00000515509 ASB13Q8WXK3 278 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 C12orf43Q96C57 262 aaKnown RBP0.65□□□□□ -2.31
CXXC4-203ENST00000515509 IMMP2LQ96T52 175 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 TMEM109Q9BVC6 243 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 TIPINQ9BVW5 301 aa0.65□□□□□ -2.31
CXXC4-203ENST00000515509 NUMA1Q14980 2115 aa0.64□□□□□ -2.31
CXXC4-203ENST00000515509 TRAV7A0A075B6U4 112 aa0.64□□□□□ -2.31
CXXC4-203ENST00000515509 A0A0J9YW62 118 aa0.64□□□□□ -2.31
CXXC4-203ENST00000515509 TINCRA0A1B0GVN0 87 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms