RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 OR4C13Q8NGP0 309 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 OR2T10Q8NGZ9 312 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 OR4S2Q8NH73 311 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 OSR1Q8TAX0 266 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 TCTEX1D2Q8WW35 142 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 SSX3Q99909 188 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 PLEKHA2Q9HB19 425 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 NUDT15Q9NV35 164 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 DNHD1Q96M86 4753 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 C3orf85A0A1B0GTC6 90 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 ARPC1BO15143 372 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 TNFSF12O43508 249 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 PEX14O75381 377 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 MOSP00540 346 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 H2AFB2P0C5Z0 115 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 UCP1P25874 307 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 LINC00205P59089 165 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 CBX3Q13185 183 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 OXA1LQ15070 435 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 POU2AF1Q16633 256 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 C16orf82Q7Z2V1 217 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 SGPP2Q8IWX5 399 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 SPAG16Q8N0X2 631 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 SIGLECL1Q8N7X8 197 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 ADAD2Q8NCV1 583 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 CHPT1Q8WUD6 406 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 AIFM2Q9BRQ8 373 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM222Q9H0R3 208 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 COMMD9Q9P000 198 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 FLVCR2Q9UPI3 526 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 TCF19Q9Y242 345 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 KCNIP3Q9Y2W7 256 aa9.6□□□□□ -0.87
PDLIM5-220ENST00000514830 TEX13DA0A0J9YY54 714 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 MDFIC2A0A1B0GVS7 189 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 A6NDX4 124 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 H3BUX3 64 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 PRAF2O60831 178 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 SPDEFO95238 335 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 CDS2O95674 445 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 HPRT1P00492 218 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 IL5P05113 134 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 SNRNP70P08621 437 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 LGALS7P47929 136 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 HILS1P60008 231 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 SRPXP78539 464 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 ZNF585BQ52M93 769 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 CCBE1Q6UXH8 406 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 RBMS3Q6XE24 437 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 GLDNQ6ZMI3 551 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 TMED4Q7Z7H5 227 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 LRTM2Q8N967 370 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 NPBQ8NG41 125 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 OR51H1Q8NH63 302 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 ZNF418Q8TF45 676 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 GLYATL2Q8WU03 294 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 C22orf15Q8WYQ4 148 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 IL22RA2Q969J5 263 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 FLYWCH2Q96CP2 140 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 EAF1Q96JC9 268 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM56Q96MV1 263 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 TP53RKQ96S44 253 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 GPHA2Q96T91 129 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM56-RWDD3S4R434 201 aa9.59□□□□□ -0.87
PDLIM5-220ENST00000514830 TRAV6A0A075B6T7 132 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 INMT-MINDY4F8WBC2 141 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 H7C2Y5 167 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 FCGR3BO75015 233 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 NDUFA3O95167 84 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 SFT2D2O95562 160 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 IGKV1D-33P01593 117 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 IGKV1-33P01594 117 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 IGKV1-16P04430 117 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 FGF2P09038 288 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 OR4E1P0C645 316 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 VSIG10L2P0DP72 767 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 ANXA3P12429 323 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 AKR1C4P17516 323 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 PAX6P26367 422 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 RPL15P61313 204 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 PPP1R1AQ13522 171 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 TMEM187Q14656 261 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 LYG2Q86SG7 212 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 CAPSLQ8WWF8 208 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 TSNAXQ99598 290 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-220ENST00000514830 IGHV3-72A0A0B4J1Y9 119 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 A0A0B4J2A0 478 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 DUXBA0A1W2PPF3 345 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 C9orf170A2RU37 121 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 BTBD17A6NE02 478 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 M0QZK8 103 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 FGF16O43320 207 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 HOXA3O43365 443 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms