RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 C1QL2Q7Z5L3 287 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 BAP18Q8IXM2 172 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 LRRC3BQ96PB8 259 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 TCRBV3S1A0A5B6 114 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 FAM71F2Q6NXP2 309 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 DEGS2Q6QHC5 323 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 RCHY1Q96PM5 261 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 VCX2Q9H322 139 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 FBXL15Q9H469 300 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 C21orf62Q9NYP8 219 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 IGLV3-10A0A075B6K4 115 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 SFT2D2O95562 160 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 PSG2P11465 335 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 WDR38Q5JTN6 314 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 MUC21Q5SSG8 566 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 GATD1Q8NB37 220 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 MZB1Q8WU39 189 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 WFDC12Q8WWY7 111 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 LEAP2Q969E1 77 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 FOXA2Q9Y261 457 aaPredicted RBP7.65□□□□□ -1.19
VCAN-208ENST00000512590 H3BTX0 84 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 CTSVO60911 334 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 SERF2P84101 59 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 PAQR9Q6ZVX9 377 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 OR1P1Q8NH06 330 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 UBE2E2Q96LR5 201 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 TXNDC17Q9BRA2 123 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 TMEM204Q9BSN7 226 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 ZNF696Q9H7X3 374 aa7.65□□□□□ -1.19
VCAN-208ENST00000512590 APOHP02749 345 aaPredicted RBP7.64□□□□□ -1.19
VCAN-208ENST00000512590 POLR2GP62487 172 aaKnown RBP eCLIP7.64□□□□□ -1.19
VCAN-208ENST00000512590 C2orf68Q2NKX9 166 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 MRPL14Q6P1L8 145 aaKnown RBP7.64□□□□□ -1.19
VCAN-208ENST00000512590 LRP10Q7Z4F1 713 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 SHPRHQ149N8 1683 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 ANKRD26Q9UPS8 1709 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 A0A1W2PQD3 144 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 FABP2P12104 132 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 PRSS41Q7RTY9 318 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
VCAN-208ENST00000512590 GSN-AS1Q9NRJ2 163 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 ZNF275Q9NSD4 429 aaPredicted RBP7.64□□□□□ -1.19
VCAN-208ENST00000512590 CELA2AP08217 269 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 MRM1Q6IN84 353 aaKnown RBP7.64□□□□□ -1.19
VCAN-208ENST00000512590 ANGPTL4Q9BY76 406 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 SLC35B3Q9H1N7 401 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 KCNE5Q9UJ90 142 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 E9PLN8 166 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 MBPP02686 304 aaPredicted RBP7.64□□□□□ -1.19
VCAN-208ENST00000512590 EFNA4P52798 201 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 GPHB5Q86YW7 130 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 PGLYRP3Q96LB9 341 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 VKORC1Q9BQB6 163 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 MS4A6AQ9H2W1 248 aa7.64□□□□□ -1.19
VCAN-208ENST00000512590 A0A1B0GV72 72 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 PAX4O43316 350 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 CD28P10747 220 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 RPL36AP83881 106 aaKnown RBP7.63□□□□□ -1.19
VCAN-208ENST00000512590 RPL36ALQ969Q0 106 aaKnown RBP7.63□□□□□ -1.19
VCAN-208ENST00000512590 CNRIP1Q96F85 164 aaPredicted RBP7.63□□□□□ -1.19
VCAN-208ENST00000512590 PHYHIPLQ96FC7 376 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 SMIM2Q9BVW6 85 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 NIT2Q9NQR4 276 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 IGHV3OR16-8A0A075B7F1 116 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 PIGYQ3MUY2 71 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 ZNF645Q8N7E2 425 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 OR5A1Q8NGJ0 315 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 SAP25Q8TEE9 199 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 PPP1R1CQ8WVI7 109 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 ST6GALNAC2Q9UJ37 374 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 C1QL1O75973 258 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 Q8NFD4 153 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 SNHG12Q9BXW3 62 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 AURKAIP1Q9NWT8 199 aaPredicted RBP7.63□□□□□ -1.19
VCAN-208ENST00000512590 LOXHD1Q8IVV2 1947 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 RRHO14718 337 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 OR2H2O95918 312 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 CLEC18BQ6UXF7 455 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 A0A0B4J2E0 115 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 A0A1B0GX12 115 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 CD5P06127 495 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 ERGP11308 486 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 OR51G1Q8NGK1 321 aa7.63□□□□□ -1.19
VCAN-208ENST00000512590 KLF14Q8TD94 323 aaPredicted RBP7.63□□□□□ -1.19
VCAN-208ENST00000512590 PTPRZ1P23471 2315 aaPredicted RBP7.63□□□□□ -1.19
VCAN-208ENST00000512590 EVI2AP22794 236 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 SPRED3Q2MJR0 410 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 TMEM160Q9NX00 188 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 MED19A0JLT2 244 aaPredicted RBP7.62□□□□□ -1.19
VCAN-208ENST00000512590 MUC1P15941 1255 aaPredicted RBP7.62□□□□□ -1.19
VCAN-208ENST00000512590 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 GOLT1AQ6ZVE7 132 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 SLC25A2Q9BXI2 301 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 ST20Q9HBF5 79 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 FAM60AQ9NP50 221 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 FLVCR2Q9UPI3 526 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 F11RQ9Y624 299 aaKnown RBP7.62□□□□□ -1.19
VCAN-208ENST00000512590 SRIP30626 198 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 CEACAM21Q3KPI0 293 aa7.62□□□□□ -1.19
VCAN-208ENST00000512590 SCMH1Q96GD3 660 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms