RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 CLCF1Q9UBD9 225 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 SRSF10O75494 262 aaKnown RBP11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 APELAP0DMC3 54 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 WDR82Q6UXN9 313 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 DTX1Q86Y01 620 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 FAM216BQ8N7L0 139 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 OR4P4Q8NGL7 312 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 OR5B3Q8NH48 314 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 OR9G1Q8NH87 305 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 PLPPR1Q8TBJ4 325 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 TUBD1Q9UJT1 453 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 TRAV24A0A0B4J272 114 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 PPIAL4CA0A0B4J2A2 164 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 PPIAL4GP0DN37 164 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 ABHD12Q8N2K0 398 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 RNF2Q99496 336 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 CHRDL1Q9BU40 450 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
PCDHA4-202ENST00000512229 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 MPZP25189 248 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 RPL27AP46776 148 aaKnown RBP11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 UBE2L3P68036 154 aaKnown RBP11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 PNRC1Q12796 327 aaPredicted RBP11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 FAM90A1Q86YD7 464 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 NDFIP1Q9BT67 221 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 CTDSP1Q9GZU7 261 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 HILPDAQ9Y5L2 63 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 E9PLN8 166 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 ARF6P62330 175 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 OR4F17Q8NGA8 305 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 VKORC1Q9BQB6 163 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 MRPL37Q9BZE1 423 aaKnown RBP11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 PRO3102Q9H379 93 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 MIOXQ9UGB7 285 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 RALYQ9UKM9 306 aaKnown RBP11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 C11orf94C9JXX5 98 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 GNG7O60262 68 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 RASL11BQ9BPW5 248 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 ZG16O60844 167 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 MPDU1O75352 247 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 LGALS7P47929 136 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 LYZP61626 148 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 PSG5Q15238 335 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
PCDHA4-202ENST00000512229 DVL1O14640 695 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 FABP9Q0Z7S8 132 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 TBR1Q16650 682 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 BSXQ3C1V8 233 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 DHRS7BQ6IAN0 325 aaPredicted RBP11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 MMD2Q8IY49 270 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 ASCL3Q9NQ33 180 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 IGKV1D-13A0A0B4J2D9 117 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 C7orf77A4D0Y5 90 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 PAGE4O60829 102 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 TOX4O94842 621 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 SLC25A5P05141 298 aaKnown RBP11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 IGKV1-13P0DP09 117 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 KHDC3LQ587J8 217 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 CLEC2AQ6UVW9 174 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 ZCCHC24Q8N2G6 241 aaKnown RBP11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 TMEM186Q96B77 213 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 SMDT1Q9H4I9 107 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 G3V3Q6 166 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 TDGF1P13385 188 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 LY6G6FQ5SQ64 297 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 OR4C13Q8NGP0 309 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 OR1B1Q8NGR6 318 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 RNASE6Q93091 150 aaKnown RBP11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 SMIM8Q96KF7 97 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 TCF19Q9Y242 345 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 HTTP42858 3142 aa11.05□□□□□ -0.64
PCDHA4-202ENST00000512229 SLC25A17O43808 307 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 KBTBD11O94819 623 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 ARG1P05089 322 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 HTR1DP28221 377 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 C1QTNF12Q5T7M4 302 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 DPPA3Q6W0C5 159 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 OR4X1Q8NH49 305 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 HGFACQ04756 655 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 RPL39P5Q59GN2 51 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 VKORC1L1Q8N0U8 176 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 PLCE1Q9P212 2302 aa11.04□□□□□ -0.64
PCDHA4-202ENST00000512229 PCDH15Q96QU1 1955 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms