RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 IL34Q6ZMJ4 242 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 C6orf201Q7Z4U5 140 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 LINC00596Q86U02 117 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 IZUMO1Q8IYV9 350 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 OR8H3Q8N146 312 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 SAMD12Q8N8I0 201 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 DUSP18Q8NEJ0 188 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 OR10R2Q8NGX6 335 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 OR9G1Q8NH87 305 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 CASTOR1Q8WTX7 329 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 COQ2Q96H96 371 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 ARHGAP5-AS1Q96IT6 56 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 NEDD4LQ96PU5 975 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 URM1Q9BTM9 101 aaKnown RBP6.91□□□□□ -1.3
NUP54-211ENST00000512151 FAAP24Q9BTP7 215 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 PECRQ9BY49 303 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 WFDC10AQ9H1F0 79 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 TAS2R3Q9NYW6 316 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 SIGLEC8Q9NYZ4 499 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 EXTL2Q9UBQ6 330 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 GLS2Q9UI32 602 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 ZNF580Q9UK33 172 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 A0A0J9YWU9 116 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 A0A1W2PPE3 182 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 UBE2QL1A1L167 161 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 PDCD6O75340 191 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 RGS11O94810 467 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 LGALS1P09382 135 aaKnown RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 TRAPPC2P0DI81 140 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 TRAPPC2BP0DI82 140 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 PTHLHP12272 177 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 GNB3P16520 340 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 FUT3P21217 361 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 RAB7AP51149 207 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 F2RL1P55085 397 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 AESQ08117 197 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 CD300CQ08708 224 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 ATXN7L3Q14CW9 347 aaPredicted RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 UBE2NLQ5JXB2 153 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 RSBN1Q5VWQ0 802 aaPredicted RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 PYHIN1Q6K0P9 492 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 MZT2BQ6NZ67 158 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 MOB3BQ86TA1 216 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 AKAP14Q86UN6 197 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 DEFB125Q8N687 156 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 CHST4Q8NCG5 386 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 KIRREL1Q96J84 757 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.31
NUP54-211ENST00000512151 DPCDQ9BVM2 203 aaPredicted RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 KLK5Q9Y337 293 aaPredicted RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 AMMECR1Q9Y4X0 333 aaPredicted RBP6.9□□□□□ -1.31
NUP54-211ENST00000512151 TRAV18A0A075B6X5 111 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 TRAV39A0A0B4J263 110 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 MFNGO00587 321 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 CTDSPLO15194 276 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 SOX15O60248 233 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 TPPPO94811 219 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 CGB3P0DN86 165 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 CGB7P0DN87 165 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 EIF2B2P49770 351 aaKnown RBP6.89□□□□□ -1.31
NUP54-211ENST00000512151 PAN3Q58A45 887 aaKnown RBP6.89□□□□□ -1.31
NUP54-211ENST00000512151 LINC00336Q6ZUF6 198 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 GTSCR1Q86UQ5 136 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 ZNF575Q86XF7 245 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 OR56B1Q8NGI3 324 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 OR2T10Q8NGZ9 312 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 RAB3CQ96E17 227 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 HDHD3Q9BSH5 251 aaPredicted RBP6.89□□□□□ -1.31
NUP54-211ENST00000512151 ELOVL1Q9BW60 279 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 ING3Q9NXR8 418 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 HSF4Q9ULV5 492 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 PSG11Q9UQ72 335 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 FBXO7Q9Y3I1 522 aa6.89□□□□□ -1.31
NUP54-211ENST00000512151 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 ODAMA1E959 279 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 METTL21EPA6NDL7 271 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 MCRIP1C9JLW8 97 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 HSD17B6O14756 317 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 ATP6V0E1O15342 81 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 LYRM1O43325 122 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 XRCC3O43542 346 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 GSTZ1O43708 216 aaPredicted RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 SSX5O60225 188 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 CNIH1O95406 144 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 MT-ND4P03905 459 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 CSN2P05814 226 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 OR5H8P0DN80 308 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 HIST1H1DP16402 221 aaKnown RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 GNG10P50151 68 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 TAS2R20P59543 309 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 ZNF816Q0VGE8 651 aaPredicted RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 CDNFQ49AH0 187 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 GAPTQ8N292 157 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms