RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CT45A6P0DMU7 189 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 CT45A5P0DMU8 189 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 CT45A7P0DMV0 189 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 RPL12P30050 165 aaKnown RBP12.4□□□□□ -0.42
SCLT1-209ENST00000511426 LMO4P61968 165 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 UBA52P62987 128 aaKnown RBP12.4□□□□□ -0.42
SCLT1-209ENST00000511426 EIF5AP63241 154 aaKnown RBP12.4□□□□□ -0.42
SCLT1-209ENST00000511426 OR2B11Q5JQS5 317 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 UTF1Q5T230 341 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 ZNF383Q8NA42 475 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 OSR1Q8TAX0 266 aaPredicted RBP12.4□□□□□ -0.42
SCLT1-209ENST00000511426 SLC25A31Q9H0C2 315 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 C11orf1Q9H5F2 150 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 SLC35D1Q9NTN3 355 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 ONECUT1Q9UBC0 465 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
SCLT1-209ENST00000511426 KMT2BQ9UMN6 2715 aaPredicted RBP12.39□□□□□ -0.43
SCLT1-209ENST00000511426 SCAF4O95104 1147 aaKnown RBP12.39□□□□□ -0.43
SCLT1-209ENST00000511426 EPHA1P21709 976 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 G6PCP35575 357 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 VAMP2P63027 116 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 BAXQ07812 192 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 MIDNQ504T8 468 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 TGIF2LXQ8IUE1 241 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 FOXRED2Q8IWF2 684 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 HSPB7Q9UBY9 170 aa12.39□□□□□ -0.43
SCLT1-209ENST00000511426 IGHV2-70DA0A0C4DH43 119 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 TSC22D2O75157 780 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 FGF2P09038 288 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 HKR1P10072 659 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 AP2S1P53680 142 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 POLR2GP62487 172 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 PAX2Q02962 417 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 CXorf66Q5JRM2 361 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 Q6ZRM9 215 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 C1orf229Q6ZS94 237 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 OR2C3Q8N628 320 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 Q8N7P7 452 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 OR8H1Q8NGG4 311 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 OR52E5Q8NH55 327 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 CIB3Q96Q77 187 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 NARFLQ9H6Q4 476 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 LYRM2Q9NU23 88 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 ITGB1BP2Q9UKP3 347 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 H0YJW9 148 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 SYNGR2O43760 224 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 CRYZL1O95825 349 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 SLC25A16P16260 332 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 CEACAM3P40198 252 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 RPL23AP62750 156 aaKnown RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 NDUFA5Q16718 116 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 TMEM177Q53S58 311 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 ZNF787Q6DD87 383 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 LRRC75A-AS1Q8N1F1 130 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 STOML3Q8TAV4 291 aa12.38□□□□□ -0.43
SCLT1-209ENST00000511426 BEX4Q9NWD9 120 aaPredicted RBP12.38□□□□□ -0.43
SCLT1-209ENST00000511426 OOSP1A8MZH6 123 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 GAPDHP04406 335 aaKnown RBP12.37□□□□□ -0.43
SCLT1-209ENST00000511426 TNFRSF9Q07011 255 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 ZNF680Q8NEM1 530 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 VSTM2AQ8TAG5 236 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 RHOVQ96L33 236 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 MRPL20Q9BYC9 149 aaKnown RBP12.37□□□□□ -0.43
SCLT1-209ENST00000511426 ZC4H2Q9NQZ6 224 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
SCLT1-209ENST00000511426 MSGN1A6NI15 193 aa12.36□□□□□ -0.43
SCLT1-209ENST00000511426 SSSCA1O60232 199 aa12.36□□□□□ -0.43
SCLT1-209ENST00000511426 ARF6P62330 175 aa12.36□□□□□ -0.43
SCLT1-209ENST00000511426 OR4P4Q8NGL7 312 aa12.36□□□□□ -0.43
SCLT1-209ENST00000511426 SMIM8Q96KF7 97 aa12.36□□□□□ -0.43
SCLT1-209ENST00000511426 UBQLN2Q9UHD9 624 aa12.36□□□□□ -0.43
SCLT1-209ENST00000511426 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-209ENST00000511426 HRNRQ86YZ3 2850 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-209ENST00000511426 ODF3BA8MYP8 253 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 CHST1O43916 411 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 JTBO76095 146 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 TPT1P13693 172 aaKnown RBP12.35□□□□□ -0.43
SCLT1-209ENST00000511426 HTR1DP28221 377 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 LGALS7P47929 136 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 LINC00205P59089 165 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 UBE2KP61086 200 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 OR8H3Q8N146 312 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 OR4A16Q8NH70 328 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 OR4A5Q8NH83 315 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 LHX4Q969G2 390 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 RPEQ96AT9 228 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
SCLT1-209ENST00000511426 RNF5Q99942 180 aa12.35□□□□□ -0.43
SCLT1-209ENST00000511426 ZNF471Q9BX82 626 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-209ENST00000511426 TMEM140Q9NV12 185 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms