RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 DOCK10Q96BY6 2186 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 CHD5Q8TDI0 1954 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 SLX4Q8IY92 1834 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 TMED7-TICAM2A0A0A6YYA0 188 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 TRGV5A0A0B4J1U4 118 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 TRAV41A0A0B4J266 112 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 A0A1B0GVG6 124 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 OR6C6A6NF89 314 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 ITGB1BP1O14713 200 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 CETN3O15182 167 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 PFDN6O15212 129 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 SSNA1O43805 119 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 GPX1P07203 203 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 CXCR4P61073 352 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 TBPL1P62380 186 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 HOXC5Q00444 222 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 PPP1R1AQ13522 171 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 PABPC1L2AQ5JQF8 200 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 N4BP2L1Q5TBK1 243 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 CST9Q5W186 159 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 SLC51BQ86UW2 128 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 LRRC28Q86X40 367 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 CLDND2Q8NHS1 167 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 EEF1AKMT1Q8WVE0 214 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 TIMM21Q9BVV7 248 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 TMEM222Q9H0R3 208 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 HDHD2Q9H0R4 259 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 HES4Q9HCC6 221 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 PLEKHJ1Q9NW61 149 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 ZNHIT6Q9NWK9 470 aaKnown RBP1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 C15orf41Q9Y2V0 281 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 POLR3HQ9Y535 204 aaPredicted RBP1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 FAM215AQ9Y5M1 114 aa1.27□□□□□ -2.21
TRAPPC11-207ENST00000511409 THSD7AQ9UPZ6 1657 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 KDM5BQ9UGL1 1544 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 GRIN2BQ13224 1484 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 A0A0A6YYH2 397 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 A6NJ64 397 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 NPYP01303 97 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 TYMSP04818 313 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 CD24P25063 80 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 CCR2P41597 374 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 BLVRAP53004 296 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 CTBP2P56545 445 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 MAP3K7CLP57077 242 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 TMEM258P61165 79 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 RPS24P62847 133 aaKnown RBP1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 SAPCD1Q5SSQ6 148 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 RASSF6Q6ZTQ3 369 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 SMCR5Q8TEV8 140 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 RAB2BQ8WUD1 216 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 RNASE6Q93091 150 aaKnown RBP1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 ZNF625Q96I27 306 aaPredicted RBP1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 TTTY13Q9BZ97 58 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 PRO2289Q9P1D8 64 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 CRCT1Q9UGL9 99 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 HHLA3Q9XRX5 114 aa1.26□□□□□ -2.21
TRAPPC11-207ENST00000511409 DENND4BO75064 1496 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 A0A087WUU8 490 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 TMSB15BA0A087X1C1 80 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 BHLHE40O14503 412 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 KLRC4O43908 158 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 APOEP02649 317 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 SLCO1A2P46721 670 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 RBM11P57052 281 aaKnown RBP1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 SLC38A11Q08AI6 406 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 MED21Q13503 144 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 PLPPR5Q32ZL2 321 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 TNFAIP8L2Q6P589 184 aaPredicted RBP1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 FAM151BQ6UXP7 276 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 Q6ZTI0 123 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 HIST2H3AQ71DI3 136 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 Q8N402 240 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 UBL4BQ8N7F7 174 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 OR51T1Q8NGJ9 327 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 MAP1LC3AQ9H492 121 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 DKKL1Q9UK85 242 aa1.25□□□□□ -2.21
TRAPPC11-207ENST00000511409 NYNRINQ9P2P1 1898 aaKnown RBP1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 OCM2P0CE71 109 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 COX5BP10606 129 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 DDTP30046 118 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 FXYD7P58549 80 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 TAS2R20P59543 309 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 AP1S1P61966 158 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 RELAQ04206 551 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 MGAT3Q09327 533 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 TPRXLQ17RH7 258 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 LGALS9BQ3B8N2 356 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 ZNF705AQ6ZN79 300 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 COMMD7Q86VX2 200 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 GPHB5Q86YW7 130 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 OR8B12Q8NGG6 310 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 OR2T27Q8NH04 317 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 ZNF675Q8TD23 568 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 TMA16Q96EY4 203 aaKnown RBP1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 LLPHQ9BRT6 129 aaKnown RBP1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 CXorf21Q9HAI6 301 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 HRASLSQ9HDD0 168 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 FGFR1OP2Q9NVK5 253 aa1.24□□□□□ -2.21
TRAPPC11-207ENST00000511409 FKBP14Q9NWM8 211 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms