RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SUMF2Q8NBJ7 301 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR52L1Q8NGH7 329 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR51A2Q8NGJ7 313 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR51S1Q8NGJ8 323 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR10G4Q8NGN3 311 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR2K2Q8NGT1 345 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR4S2Q8NH73 311 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 GALMQ96C23 342 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 ACY3Q96HD9 319 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CAPZA3Q96KX2 299 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CNBD2Q96M20 576 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 BIRC8Q96P09 236 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 RSPO3Q9BXY4 272 aaPredicted RBP2.65□□□□□ -1.99
NUP54-209ENST00000510569 MROQ9BYG7 248 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 YIPF3Q9GZM5 350 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 OR51I2Q9H344 312 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 SH2D2AQ9NP31 389 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 CISHQ9NSE2 258 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 GLS2Q9UI32 602 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 NFASCO94856 1347 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 IGSF9BQ9UPX0 1349 aa2.65□□□□□ -1.99
NUP54-209ENST00000510569 TNRC18O15417 2968 aaPredicted RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 MYH9P35579 1960 aaKnown RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 IGKV1D-8A0A087WSZ0 117 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 A0A096LPI6 279 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 A0A0G2JLM5 398 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 ZNF726A6NNF4 738 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 ZNF705EA8MWA4 302 aaPredicted RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 E9PLD3 99 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 G3V2T6 193 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 K7ERU9 68 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 COPEO14579 308 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 RGS5O15539 181 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 CHST10O43529 356 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 REM1O75628 298 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 CCNE2O96020 404 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 IGKV1D-16P01601 117 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 IGHG2P01859 326 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 PFN1P07737 140 aaKnown RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 MMP7P09237 267 aaPredicted RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 CD37P11049 281 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 GGT1P19440 569 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 LGALS7P47929 136 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 MARCKSL1P49006 195 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 PIGPP57054 158 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 FKBP1AP62942 108 aaKnown RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 RUNX1Q01196 453 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 MXD1Q05195 221 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 ZNF616Q08AN1 781 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 BATFQ16520 125 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 IAH1Q2TAA2 248 aaPredicted RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 CDNFQ49AH0 187 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 KLF17Q5JT82 389 aaPredicted RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 FAM162BQ5T6X4 162 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 TMPPEQ6ZT21 453 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 IFT20Q8IY31 132 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 UMODL1-AS1Q8N2C9 162 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 MUC15Q8N387 334 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 C20orf203Q8NBC4 194 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 JOSD2Q8TAC2 188 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 ZFP90Q8TF47 636 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 RDH12Q96NR8 316 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 OR2M4Q96R27 311 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 OR2M2Q96R28 347 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 OR4K3Q96R72 315 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 HSPB9Q9BQS6 159 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 EFCAB11Q9BUY7 163 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 C1orf50Q9BV19 199 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 EBPLQ9BY08 206 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 TMEM126AQ9H061 195 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 SH3BGRL3Q9H299 93 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 LYRM2Q9NU23 88 aaPredicted RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 CALYQ9NYX4 217 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 CALML5Q9NZT1 146 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 PCYOX1Q9UHG3 505 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 VAX2Q9UIW0 290 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 RBM7Q9Y580 266 aaKnown RBP2.64□□□□□ -1.99
NUP54-209ENST00000510569 KCNE3Q9Y6H6 103 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 ZNF780BQ9Y6R6 833 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 PAPPA2Q9BXP8 1791 aa2.64□□□□□ -1.99
NUP54-209ENST00000510569 COL4A5P29400 1685 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 COL1A2P08123 1366 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 ANK1P16157 1881 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 A0A0G2JMZ2 1700 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 LRRC37A2A6NM11 1700 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 SSC5DA1L4H1 1573 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 PCNTO95613 3336 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 A0A087WX48 190 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 IGHV1OR21-1A0A087WYE8 117 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 A0A1B0GX51 115 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 EEF1E1-BLOC1S5C9J1V9 151 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 I3L4J1 428 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 J3QT63 122 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 TP53I11O14683 189 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 DEGS1O15121 323 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 EEF1E1O43324 174 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 NPIPB7O75200 414 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 SCRG1O75711 98 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 YIF1AO95070 293 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms