RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 HPRT1P00492 218 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 IGLV1-44P01699 117 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 JMJD7P0C870 316 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 TFF3Q07654 80 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 MZT1Q08AG7 82 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 WDR82Q6UXN9 313 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 OR4F5Q8NH21 305 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 KLF14Q8TD94 323 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 YPEL2Q96QA6 119 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 OR4F4Q96R69 305 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 SLC25A22Q9H936 323 aa7.69□□□□□ -1.18
PDGFRA-208ENST00000509490 TRGV5A0A0B4J1U4 118 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 TRAV39A0A0B4J263 110 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 XKRY2A2RUG3 117 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 F2RL2O00254 374 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 STAG3L2P0CL84 134 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 AREGP15514 252 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 TAS2R60P59551 318 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 RAB4BP61018 213 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 SELENOTP62341 195 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 GBGT1Q8N5D6 347 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 OR52L2PQ8NGH6 319 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 TMEM18Q96B42 140 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 LOXL4Q96JB6 756 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 WASF3Q9UPY6 502 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 LSM4Q9Y4Z0 139 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 PXMP4Q9Y6I8 212 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 LAMA1P25391 3075 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 MED12LQ86YW9 2145 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 A0A087X0M5 115 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 A0A1B0GX30 115 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 MARCH11A6NNE9 402 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 C11orf94C9JXX5 98 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 SLC31A2O15432 143 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 PAGE4O60829 102 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 KRASP01116 189 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 DUTP33316 252 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 GNB1P62873 340 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 HNF4GQ14541 408 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 NINJ1Q92982 152 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 RPUSD4Q96CM3 377 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 PCGF1Q9BSM1 259 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 CHD3Q12873 2000 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 LINC00473A8K010 186 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 CELA3BP08861 270 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 UBE2NP61088 152 aaKnown RBP7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 FOXF2Q12947 444 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 POU2AF1Q16633 256 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 SMIM21Q3B7S5 101 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 ALKBH6Q3KRA9 238 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 S100PBPQ96BU1 408 aa7.68□□□□□ -1.18
PDGFRA-208ENST00000509490 C9JCJ5 164 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 IL3RAP26951 378 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ATP5IP56385 69 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 C3orf36Q3SXR2 165 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 SPATA46Q5T0L3 261 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 Q6ZR03 302 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 TMEM178AQ8NBL3 297 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 DDB2Q92466 427 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 R3HDM4Q96D70 268 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 SFXN3Q9BWM7 321 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 PLA2G3Q9NZ20 509 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 TRIOO75962 3097 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNHIT1O43257 154 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 CGB3P0DN86 165 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 CGB7P0DN87 165 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 CD82P27701 267 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 MPV17P39210 176 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 CNN1P51911 297 aaKnown RBP7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNF816Q0VGE8 651 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNF718Q3SXZ3 478 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ZNF664Q8N3J9 261 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 GATAD1Q8WUU5 269 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ZDHHC16Q969W1 377 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 ELOVL1Q9BW60 279 aa7.67□□□□□ -1.18
PDGFRA-208ENST00000509490 SPINT2O43291 252 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 PROP1O75360 226 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 CXorf1O96002 111 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 IL6RP08887 468 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 P2RY6Q15077 328 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 IQCJQ1A5X6 159 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 TMEM30BQ3MIR4 351 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 C4orf17Q53FE4 359 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 IGF2-ASQ6U949 168 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 PRR18Q8N4B5 295 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 ELOVL5Q9NYP7 299 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 GTF3C1Q12789 2109 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 KIR2DL5BA0A0G2JN68 375 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 KIR2DL5BA0A0G2JPC4 375 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 GFRA3O60609 400 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 OR10J4P0C629 311 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 OR9G9P0C7N8 305 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 TNFSF10P50591 281 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 ERVS71-1P61550 626 aa7.66□□□□□ -1.18
PDGFRA-208ENST00000509490 AESQ08117 197 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms