RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 MMP23AO75900 390 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 TMEM95Q3KNT9 176 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
HMGCL-208ENST00000509389 HEPN1Q6WQI6 88 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 ZNF439Q8NDP4 499 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 OR52B4Q8NGK2 314 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 YPEL2Q96QA6 119 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 CLEC7AQ9BXN2 247 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 SHPKQ9UHJ6 478 aa11.66□□□□□ -0.54
HMGCL-208ENST00000509389 C14orf166Q9Y224 244 aaKnown RBP11.66□□□□□ -0.54
HMGCL-208ENST00000509389 A0A087X0M5 115 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 A0A1B0GX30 115 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 FAM172BPA6NC97 362 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 DBX1A6NMT0 343 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 DUS4LO95620 317 aaKnown RBP11.65□□□□□ -0.55
HMGCL-208ENST00000509389 PI3P19957 117 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 VDAC2P45880 294 aaPredicted RBP11.65□□□□□ -0.55
HMGCL-208ENST00000509389 FXYD4P59646 89 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 EIF4EBP1Q13541 118 aaPredicted RBP11.65□□□□□ -0.55
HMGCL-208ENST00000509389 PRR18Q8N4B5 295 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 BVESQ8NE79 360 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 OR52L2PQ8NGH6 319 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 UBALD1Q8TB05 177 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 TOMM40LQ969M1 308 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 PPP1R14BQ96C90 147 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 AGMATQ9BSE5 352 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 GAL3ST2Q9H3Q3 398 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 GFOD1Q9NXC2 390 aa11.65□□□□□ -0.55
HMGCL-208ENST00000509389 GPR31O00270 319 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 SFT2D2O95562 160 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 HLA-AP01891 365 aaKnown RBP11.64□□□□□ -0.55
HMGCL-208ENST00000509389 PGAM2P15259 253 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 HLA-GP17693 338 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 HTR1DP28221 377 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 CEACAM6P40199 344 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 LUMP51884 338 aaPredicted RBP11.64□□□□□ -0.55
HMGCL-208ENST00000509389 MORN2Q502X0 79 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 C4orf46Q504U0 113 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF818PQ6ZRF7 136 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 OR11H7Q8NGC8 314 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 OR4P4Q8NGL7 312 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF596Q8TC21 504 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 MRAPQ8TCY5 172 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 EDARADDQ8WWZ3 215 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 AKR1E2Q96JD6 320 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 ST6GAL2Q96JF0 529 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 OR2S2Q9NQN1 319 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 IDI2-AS1Q9NZ38 188 aa11.64□□□□□ -0.55
HMGCL-208ENST00000509389 HSPA12AO43301 675 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 PPP1CCP36873 323 aaKnown RBP11.63□□□□□ -0.55
HMGCL-208ENST00000509389 PIGPP57054 158 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 CD83Q01151 205 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 CBX3Q13185 183 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 FCN2Q15485 313 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 PRAMEF5Q5TYX0 476 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 FAM53AQ6NSI3 398 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-208ENST00000509389 KCTD9Q7L273 389 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 ABHD12Q8N2K0 398 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 CCDC71LQ8N9Z2 235 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 OR2AK2Q8NG84 335 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 OR5AU1Q8NGC0 362 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 RFESDQ8TAC1 157 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 SECTM1Q8WVN6 248 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
HMGCL-208ENST00000509389 C5orf30Q96GV9 206 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 SLC5A7Q9GZV3 580 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 CCL28Q9NRJ3 127 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
HMGCL-208ENST00000509389 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 A0A1W2PRX2 142 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 SLC22A5O76082 557 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 RGS11O94810 467 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 CD24P25063 80 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 CD34P28906 385 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 AKAP14Q86UN6 197 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 C12orf45Q8N5I9 185 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-208ENST00000509389 LRTM2Q8N967 370 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 MED28Q9H204 178 aa11.62□□□□□ -0.55
HMGCL-208ENST00000509389 AURKAIP1Q9NWT8 199 aaPredicted RBP11.62□□□□□ -0.55
HMGCL-208ENST00000509389 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 MPPED1O15442 326 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 B3GALNT1O75752 331 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 OR2A4O95047 310 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 AKR1C4P17516 323 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 CXCL3P19876 107 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 UTF1Q5T230 341 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 C16orf82Q7Z2V1 217 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 TCTE3Q8IZS6 198 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 LINC00311Q8N616 119 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 DRAM1Q8N682 238 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 WFDC9Q8NEX5 89 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms