RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PBOV1Q9GZY1 135 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 MED31Q9Y3C7 131 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TRBV5-7A0A0A0MS05 114 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 C2CD4DB7Z1M9 353 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 H3BSA7 217 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 MRPS14O60783 128 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 S100A11P31949 105 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ETV6P41212 452 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 CDKN2AP42771 156 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 GZMMP51124 257 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 RPL38P63173 70 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 PIK3CD-AS1Q5SR53 167 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TOMM20LQ6UXN7 152 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 USP43Q70EL4 1123 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 CBLL1Q75N03 491 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 HSD17B13Q7Z5P4 300 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 AQP11Q8NBQ7 271 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TPRKBQ9Y3C4 175 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 MN1Q10571 1320 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 CEP192Q8TEP8 1941 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TRAV5A0A0B4J249 113 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 A0A0G2JLM5 398 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 RNF222A6NCQ9 220 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ARRDC5A6NEK1 342 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF705FA8MVS1 300 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SS18L1O75177 396 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SP1P08047 785 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 FAM157CP0CG43 387 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF705BP0CI00 300 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 S100A3P33764 101 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TMBIM6P55061 237 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 PAX8Q06710 450 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 BTN1A1Q13410 526 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 FHL3Q13643 280 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF169Q14929 603 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 OR5A2Q8NGI9 324 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 OR51T1Q8NGJ9 327 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 F2RL3Q96RI0 385 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 VAMP8Q9BV40 100 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 KRTAP3-3Q9BYR6 98 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 KRTAP3-2Q9BYR7 98 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 HLA-EP13747 358 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 GAS1P54826 345 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 APOC4P55056 127 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 FABP5Q01469 135 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ERCC8Q13216 396 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 NOXRED1Q6NXP6 359 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 WDR82Q6UXN9 313 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF519Q8TB69 540 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF385AQ96PM9 386 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 MLST8Q9BVC4 326 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 FBXL12Q9NXK8 326 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 DHCR7Q9UBM7 475 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 NEUROG3Q9Y4Z2 214 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 A0A0G2JN53 185 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 H7BYZ3 331 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TP53I11O14683 189 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZG16O60844 167 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TNFSF15O95150 251 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 HGFACQ04756 655 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 FMODQ06828 376 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TEX36Q5VZQ5 186 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 NANOGP8Q6NSW7 305 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 MRPL54Q6P161 138 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 RFLNAQ6ZTI6 216 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ASB13Q8WXK3 278 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 PRORYQ9H606 182 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 NANOGQ9H9S0 305 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TXNL4BQ9NX01 149 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 A0A0B4J2E0 115 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 LOC389332A0A1B0GUA5 103 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 A0A1B0GX12 115 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 hADV38S2A0JD32 116 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF99A8MXY4 864 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 C1QTNF9BB2RNN3 333 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SHISA9B4DS77 424 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 RBP4P02753 201 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SHC1P29353 583 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 GNG4P50150 75 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 TRMT12Q53H54 448 aaKnown RBP3.26□□□□□ -1.89
NEDD4-209ENST00000508871 KHDC3LQ587J8 217 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SLC25A30Q5SVS4 291 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SNX29P2Q8IUI4 249 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 SPNS2Q8IVW8 549 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 PSMF1Q92530 271 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 MS4A8Q9BY19 250 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 HSPE1-MOB4S4R3N1 261 aa3.26□□□□□ -1.89
NEDD4-209ENST00000508871 A0A0A6YYD5 115 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 IGLV5-39A0A0G2JS06 123 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 FAM236DA0A1B0GTK5 79 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 FAM24AA6NFZ4 105 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 PHOX2AO14813 284 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 EFNA2O43921 213 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 FGF17O60258 216 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 GALR3O60755 368 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 PMP2P02689 132 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 FAM236CP0DP71 79 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 PCBD1P61457 104 aa3.25□□□□□ -1.89
NEDD4-209ENST00000508871 HIST1H1AQ02539 215 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-209ENST00000508871 IL15RAQ13261 267 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms