RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 OR8G2PQ6IF36 304 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 Q8TCH9 128 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 FAM222BQ8WU58 562 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 RAB39BQ96DA2 213 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 MALSU1Q96EH3 234 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 C5orf30Q96GV9 206 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 SNX22Q96L94 193 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 CISD1Q9NZ45 108 aaKnown RBP9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 SH3BGRL2Q9UJC5 107 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 JPT1Q9UK76 154 aa9.61□□□□□ -0.87
PRPF40B-203ENST00000508736 IGKV1D-17A0A075B6S4 117 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 A0A1W2PPE2 198 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 DPRXA6NFQ7 191 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 C17orf98A8MV24 154 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 B4DEV8 164 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 MGST3O14880 152 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 RBMXL2O75526 392 aaKnown RBP9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 MBP02144 154 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 EGR1P18146 543 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 AGAP20933 346 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 TNFSF4P23510 183 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 MAS1LP35410 378 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 TAGLN2P37802 199 aaKnown RBP9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 CA7P43166 264 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 GPR12P47775 334 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 EDDM3AQ14507 147 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 CR1LQ2VPA4 569 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 BTNL3Q6UXE8 466 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 WFDC8Q8IUA0 241 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 FAM24BQ8N5W8 94 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 ST6GALNAC3Q8NDV1 305 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 DTD1Q8TEA8 209 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 ITLN1Q8WWA0 313 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 RCC1LQ96I51 464 aaKnown RBP9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 P2RX4Q99571 388 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 SIRT7Q9NRC8 400 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 PSG11Q9UQ72 335 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 DIDO1Q9BTC0 2240 aaKnown RBP9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
PRPF40B-203ENST00000508736 MAP1LC3B2A6NCE7 125 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 CXorf65A6NEN9 183 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 C15orf65H3BRN8 121 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 SPRY3O43610 288 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 IFNA17P01571 189 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 IGHV1-46P01743 117 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 ARG1P05089 322 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 CD55P08174 381 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 TNFAIP6P98066 277 aaPredicted RBP9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 PNRC1Q12796 327 aaPredicted RBP9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 FBXL19-AS1Q494R0 122 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 LCN15Q6UWW0 184 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 MOGAT3Q86VF5 341 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 ZNF843Q8N446 348 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 OR10P1Q8NGE3 313 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 MAP1LC3BQ9GZQ8 125 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 RNF7Q9UBF6 113 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 GNG12Q9UBI6 72 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 PCNX1Q96RV3 2341 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 POLEQ07864 2286 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 IGHV3-43A0A0B4J1X8 118 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 hCG_1809904A0A1W2PP81 198 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 A0A1W2PR64 198 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 A0A1W2PRV1 198 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 MARCH11A6NNE9 402 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 FAM90A9PA6NNJ1 464 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 CEBPZOSA8MTT3 80 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 VSTM5A8MXK1 200 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 IGHV3-43DP0DP04 118 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 DLK1P80370 383 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 TLE1Q04724 770 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 BSPH1Q075Z2 132 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 PMS2P11Q13670 270 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 RBMS3Q6XE24 437 aaKnown RBP9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 CENPVQ7Z7K6 275 aaPredicted RBP9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 TPRX1Q8N7U7 411 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 GCM1Q9NP62 436 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 CLN8Q9UBY8 286 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 CACNA1DQ01668 2161 aa9.59□□□□□ -0.87
PRPF40B-203ENST00000508736 TRGV8A0A0C4DH27 118 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 ZNF98A6NK75 572 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 TFF1P04155 84 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 ELLP55199 621 aaPredicted RBP9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 RAB11AP62491 216 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 ADIPOQQ15848 244 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 SPRNQ5BIV9 151 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 C1QL4Q86Z23 238 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 R3HDM4Q96D70 268 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 ZNF665Q9H7R5 613 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 SLC39A9Q9NUM3 307 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 OR6C3Q9NZP0 311 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
PRPF40B-203ENST00000508736 CHD6Q8TD26 2715 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms