RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DEFA5Q01523 94 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 TAGLNQ01995 201 aaKnown RBP9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 SRSF7Q16629 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 RTL8BQ17RB0 113 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 Q6ZS49 121 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 OVCH2Q7RTZ1 564 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 OR5T1Q8NG75 326 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 OR4C12Q96R67 309 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 ZNF355PQ9NSJ1 428 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 ELF5Q9UKW6 265 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.81
HMGCS1-205ENST00000508319 LINC00473A8K010 186 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 SHOXO15266 292 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 BRI3O95415 125 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 IGLV1-51P01701 117 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 ZP3P21754 424 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 GALP22466 123 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 DUTP33316 252 aaKnown RBP9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 GABARAPL2P60520 117 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 C22orf42Q6IC83 251 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 BVESQ8NE79 360 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 GINS4Q9BRT9 223 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 TINAGL1Q9GZM7 467 aaPredicted RBP9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 RANGRFQ9HD47 186 aaPredicted RBP9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 STUB1Q9UNE7 303 aa9.96□□□□□ -0.82
HMGCS1-205ENST00000508319 A0A0G2JLM5 398 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 C13orf42A0A1B0GVH6 325 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 SMIM30A4D0T7 59 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 METTL21EPA6NDL7 271 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 RBMXL2O75526 392 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 CRYZL1O95825 349 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 RRASP10301 218 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 DTYMKP23919 212 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 CBX3Q13185 183 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 DYRK1AQ13627 763 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 ARFRP1Q13795 201 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 PRSS8Q16651 343 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 IDO2Q6ZQW0 420 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 TMEM68Q96MH6 324 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 RSRP1Q9BUV0 290 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 ELOVL1Q9BW60 279 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 RAB26Q9ULW5 256 aa9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 RBM7Q9Y580 266 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-205ENST00000508319 ANKRD34BA5PLL1 514 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 ERICH4A6NGS2 130 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 TRBV12-3P01733 135 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 APELAP0DMC3 54 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 TALDO1P37837 337 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 UBE2KP61086 200 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 KLF5Q13887 457 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 VMA21Q3ZAQ7 101 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 UBE2UQ5VVX9 321 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 IL34Q6ZMJ4 242 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 Q8N1Y9 231 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 TEX45Q8NA69 505 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 ADAD2Q8NCV1 583 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 OR9G4Q8NGQ1 327 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 ADTRPQ96IZ2 230 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 ATG5Q9H1Y0 275 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 COA4Q9NYJ1 87 aa9.94□□□□□ -0.82
HMGCS1-205ENST00000508319 MRPS14O60783 128 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 AADACP22760 399 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 FGF9P31371 208 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 ARL6IP1Q15041 203 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 TNXAQ16473 311 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 ZNF343Q6P1L6 599 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 ANKRD13BQ86YJ7 626 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 OSR1Q8TAX0 266 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 MUC7Q8TAX7 377 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 SRSF12Q8WXF0 261 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 PHB2Q99623 299 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 CENPOQ9BU64 300 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 ZNF430Q9H8G1 570 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 TXNL4BQ9NX01 149 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 ADAM30Q9UKF2 790 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 SACSQ9NZJ4 4579 aa9.93□□□□□ -0.82
HMGCS1-205ENST00000508319 TMEM235A6NFC5 223 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 MSGN1A6NI15 193 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 NOTOA8MTQ0 251 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 IGLV2-14P01704 120 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 OR9G9P0C7N8 305 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 SAA1P0DJI8 122 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 IGHV4-30-4P0DP06 118 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 NFYAP23511 347 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 PSMB9P28065 219 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 SYNJ2BPP57105 145 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 CDNFQ49AH0 187 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 HACD4Q5VWC8 232 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 SPARTQ8N0X7 666 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 ZNF645Q8N7E2 425 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 LGALS14Q8TCE9 139 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 NUDCD2Q8WVJ2 157 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 USMG5Q96IX5 58 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 PEF1Q9UBV8 284 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 OR2W1Q9Y3N9 320 aa9.92□□□□□ -0.82
HMGCS1-205ENST00000508319 TENM2Q9NT68 2774 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms