RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 HOXA3O43365 443 aaPredicted RBP16.67■□□□□ 0.26
HOXC9-203ENST00000508190 PEX14O75381 377 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 FAM157CP0CG43 387 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 DHODHQ02127 395 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 SLC9A3R2Q15599 337 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 AANATQ16613 207 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 TMEM128Q5BJH2 165 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 SGPP2Q8IWX5 399 aa16.67■□□□□ 0.26
HOXC9-203ENST00000508190 EAF1Q96JC9 268 aaPredicted RBP16.67■□□□□ 0.26
HOXC9-203ENST00000508190 H0Y980 276 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 VAMP1P23763 118 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 KIR2DS2P43631 304 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 TAGLNQ01995 201 aaKnown RBP16.66■□□□□ 0.26
HOXC9-203ENST00000508190 ZNF585BQ52M93 769 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 TMEM219Q86XT9 240 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 OR4S2Q8NH73 311 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 DUX5Q96PT3 197 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 MARVELD1Q9BSK0 173 aa16.66■□□□□ 0.26
HOXC9-203ENST00000508190 INMT-MINDY4F8WBC2 141 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 S1PR2O95136 353 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 MOSP00540 346 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 OR4E1P0C645 316 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 FAM106CPP0CH98 169 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 RRASP10301 218 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 TMEM11P17152 192 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 CNTFRP26992 372 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 MECP2P51608 486 aaKnown RBP16.65■□□□□ 0.26
HOXC9-203ENST00000508190 EBI3Q14213 229 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 THNSL2Q86YJ6 484 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 OR52B4Q8NGK2 314 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 OR2T10Q8NGZ9 312 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 TCF19Q9Y242 345 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 SFT2D2O95562 160 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 LPAR6P43657 344 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 UBE2MP61081 183 aaKnown RBP16.65■□□□□ 0.26
HOXC9-203ENST00000508190 CBX3Q13185 183 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 OXA1LQ15070 435 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 C4orf46Q504U0 113 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 RBMS3Q6XE24 437 aaKnown RBP16.65■□□□□ 0.26
HOXC9-203ENST00000508190 Q8N6K4 173 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 GLYATL2Q8WU03 294 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 SSMEM1Q8WWF3 244 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 FLYWCH2Q96CP2 140 aaKnown RBP16.65■□□□□ 0.26
HOXC9-203ENST00000508190 SEC22CQ9BRL7 303 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 ESM1Q9NQ30 184 aa16.65■□□□□ 0.26
HOXC9-203ENST00000508190 PLXNB1O43157 2135 aa16.64■□□□□ 0.26
HOXC9-203ENST00000508190 C9orf170A2RU37 121 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 A6NDX4 124 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 RBFOX2O43251 390 aaKnown RBP eCLIP16.64■□□□□ 0.25
HOXC9-203ENST00000508190 HLA-AP01891 365 aaKnown RBP16.64■□□□□ 0.25
HOXC9-203ENST00000508190 UCP1P25874 307 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 RPS16P62249 146 aaKnown RBP16.64■□□□□ 0.25
HOXC9-203ENST00000508190 TMEM187Q14656 261 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 TRIM16LQ309B1 348 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 TMEM177Q53S58 311 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 DHRS7BQ6IAN0 325 aaPredicted RBP16.64■□□□□ 0.25
HOXC9-203ENST00000508190 OR4C13Q8NGP0 309 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 CASTOR1Q8WTX7 329 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 GALNT14Q96FL9 552 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 HARBI1Q96MB7 349 aa16.64■□□□□ 0.25
HOXC9-203ENST00000508190 ALX4Q9H161 411 aaPredicted RBP16.64■□□□□ 0.25
HOXC9-203ENST00000508190 DNAJC9-AS1A6NH13 148 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 SRRM4A7MD48 611 aaKnown RBP16.63■□□□□ 0.25
HOXC9-203ENST00000508190 SHOXO15266 292 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 IFNA2P01563 188 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 IGKV1-39P01597 117 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 IGKV1D-39P04432 117 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 SERPINE2P07093 398 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 F2RL1P55085 397 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 DHRS2Q13268 280 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 TCTEX1D1Q8N7M0 179 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 OR5R1Q8NH85 324 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 LHFPL5Q8TAF8 219 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 CD300LFQ8TDQ1 290 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 TMEM222Q9H0R3 208 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 KCNIP3Q9Y2W7 256 aa16.63■□□□□ 0.25
HOXC9-203ENST00000508190 BTBD17A6NE02 478 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 HPRT1P00492 218 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 RPA2P15927 270 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 ANKRD55Q3KP44 614 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 LYG2Q86SG7 212 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 VKORC1L1Q8N0U8 176 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 ZNF418Q8TF45 676 aaPredicted RBP16.62■□□□□ 0.25
HOXC9-203ENST00000508190 CHPT1Q8WUD6 406 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 CHIAQ9BZP6 476 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 FAM212BQ9NTI7 297 aaPredicted RBP16.62■□□□□ 0.25
HOXC9-203ENST00000508190 VPREB3Q9UKI3 123 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 TET2Q6N021 2002 aaPredicted RBP16.62■□□□□ 0.25
HOXC9-203ENST00000508190 TNCP24821 2201 aa16.62■□□□□ 0.25
HOXC9-203ENST00000508190 CHST1O43916 411 aa16.61■□□□□ 0.25
HOXC9-203ENST00000508190 IGLV2-23P01705 113 aa16.61■□□□□ 0.25
HOXC9-203ENST00000508190 RAG2P55895 527 aa16.61■□□□□ 0.25
HOXC9-203ENST00000508190 MMDQ15546 238 aa16.61■□□□□ 0.25
HOXC9-203ENST00000508190 OSR1Q8TAX0 266 aaPredicted RBP16.61■□□□□ 0.25
HOXC9-203ENST00000508190 SLC25A33Q9BSK2 321 aa16.61■□□□□ 0.25
HOXC9-203ENST00000508190 PLEKHA2Q9HB19 425 aa16.61■□□□□ 0.25
HOXC9-203ENST00000508190 A0A0B4J293 547 aa16.6■□□□□ 0.25
HOXC9-203ENST00000508190 B3GALNT1O75752 331 aa16.6■□□□□ 0.25
HOXC9-203ENST00000508190 ANXA3P12429 323 aa16.6■□□□□ 0.25
HOXC9-203ENST00000508190 C11orf88Q6PI97 169 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms