RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 LINC00473A8K010 186 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 C15orf62A8K5M9 175 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 HBZP02008 142 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 COL8A2P25067 703 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 H2BFWTQ7Z2G1 175 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 TTTY12Q9BZ98 90 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 PATZ1Q9HBE1 687 aaKnown RBP11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 KCNIP1Q9NZI2 227 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 NAGKQ9UJ70 344 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 POLDIP2Q9Y2S7 368 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 HCFC1P51610 2035 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 MED13Q9UHV7 2174 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 MUC3AQ02505 3323 aa11.22□□□□□ -0.61
SNCAIP-209ENST00000508017 IGHV3-43A0A0B4J1X8 118 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 SOX15O60248 233 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 CLDN14O95500 239 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 IGHV3-43DP0DP04 118 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 ADMP35318 185 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 Q6ZR03 302 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF826PQ6ZT77 177 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 CXorf67Q86X51 503 aaPredicted RBP11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 MCEMP1Q8IX19 187 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 Q8IYB0 196 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 SGMS2Q8NHU3 365 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 ELOVL5Q9NYP7 299 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 LOXL2Q9Y4K0 774 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 PTPRBP23467 1997 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 DSPP15924 2871 aaKnown RBP11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 TMEM30CPA0ZSE6 113 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 C17orf112F2Z3M2 114 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 RAB29O14966 203 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 TMPRSS2O15393 492 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 ERVFC1-1P60608 527 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 CATR1Q13166 79 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 SSPNQ14714 243 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 C1orf194Q5T5A4 169 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 TMEM251Q8N6I4 163 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 MRGPRDQ8TDS7 321 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 SDSLQ96GA7 329 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 MS4A10Q96PG2 267 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 B4GALT7Q9UBV7 327 aa11.21□□□□□ -0.61
SNCAIP-209ENST00000508017 KIR2DL5BA0A0G2JN68 375 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 KIR2DL5BA0A0G2JPC4 375 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 PDE6DO43924 150 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 DCAF12Q5T6F0 453 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 TDHQ8IZJ6 230 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 KIR2DL5AQ8N109 375 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 ZBTB34Q8NCN2 500 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 SFRP2Q96HF1 295 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 ZNF705FA8MVS1 300 aaPredicted RBP11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 DEFB108AA8MXU0 73 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 SMPD2O60906 423 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 ZNF705DP0CH99 300 aaPredicted RBP11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 ZNF705BP0CI00 300 aaPredicted RBP11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 CD99P14209 185 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 SSTR5P35346 364 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 C6orf15Q6UXA7 325 aaPredicted RBP11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 LINC00696Q6ZRV3 163 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 COQ2Q96H96 371 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 CIB3Q96Q77 187 aaPredicted RBP11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 IMMP2LQ96T52 175 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
SNCAIP-209ENST00000508017 M0R143 59 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 CD1BP29016 333 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 THBS3P49746 956 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 SOX8P57073 446 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 OR1C1Q15619 314 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 CYB5R2Q6BCY4 276 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 TBX15Q96SF7 602 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 PRR14LQ5THK1 2151 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 SCO2A0A1W2PP80 73 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 F6UZH7 168 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 ARL14EPLP0DKL9 152 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 TDGF1P3P51864 188 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 PLGLB1Q02325 96 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 FOXL1Q12952 345 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 ZNF766Q5HY98 468 aa11.19□□□□□ -0.62
SNCAIP-209ENST00000508017 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 A0A1W2PPV4 95 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 TMEM210A6NLX4 147 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 RRHO14718 337 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 RAB4AP20338 218 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 GABRA2P47869 451 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms