RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 MOSP00540 346 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 CT45A6P0DMU7 189 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 CT45A5P0DMU8 189 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 CT45A7P0DMV0 189 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF182P17025 639 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-205ENST00000506924 CNTFRP26992 372 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 CD1BP29016 333 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 TMBIM6P55061 237 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 F2RL1P55085 397 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 RNASE12Q5GAN4 147 aaKnown RBP7.51□□□□□ -1.21
CLCN3-205ENST00000506924 LY6G6FQ5SQ64 297 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 FAM131AQ6UXB0 335 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 SNX29P2Q8IUI4 249 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 BEST4Q8NFU0 473 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 OR2T10Q8NGZ9 312 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 RAB2BQ8WUD1 216 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 ACOT12Q8WYK0 555 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 ISOC1Q96CN7 298 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 AKR1E2Q96JD6 320 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 S1PR3Q99500 378 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 OR2D2Q9H210 308 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 RANBP3Q9H6Z4 567 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-205ENST00000506924 SERTAD4Q9NUC0 356 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 PIPOXQ9P0Z9 390 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 ANXA10Q9UJ72 324 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF221Q9UK13 617 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 LINC01548A6NM66 108 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 H3BMQ9 156 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 M0R1X1 148 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 RGS5O15539 181 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 TXNL1O43396 289 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 NOL3O60936 208 aaKnown RBP7.5□□□□□ -1.21
CLCN3-205ENST00000506924 PEX14O75381 377 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 VDAC2P45880 294 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-205ENST00000506924 ARPC4P59998 168 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 EBI3Q14213 229 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 SRSF7Q16629 238 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLCN3-205ENST00000506924 MZT2AQ6P582 158 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 CNIH2Q6PI25 160 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 C11orf88Q6PI97 169 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 Q6ZS49 121 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 C16orf82Q7Z2V1 217 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 HOGA1Q86XE5 327 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 H1FOOQ8IZA3 346 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-205ENST00000506924 Q8N2B8 174 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 Q8N6K4 173 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 C5orf56Q8N8D9 126 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 AP3S1Q92572 193 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 C5orf30Q96GV9 206 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 IFT46Q9NQC8 304 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 LINC00527Q9UJ94 153 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 CEPT1Q9Y6K0 416 aa7.5□□□□□ -1.21
CLCN3-205ENST00000506924 ANK2Q01484 3957 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 IGKV1D-13A0A0B4J2D9 117 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 SMIM31A0A1B0GVY4 71 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 H7C2Y5 167 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 CTDSP2O14595 271 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 ITGB1BP1O14713 200 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 HLA-DQB1P01920 261 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 APOA1P02647 267 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 PMP2P02689 132 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 IGKV1-13P0DP09 117 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 PRSS3P35030 304 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 SOX6P35712 828 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 ACTBP60709 375 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 MMDQ15546 238 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 C10orf99Q6UWK7 81 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 Q8N9W7 124 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF383Q8NA42 475 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 DYNC2LI1Q8TCX1 351 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 SNAPC3Q92966 411 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 NOL4LQ96MY1 436 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-205ENST00000506924 CITED1Q99966 193 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 MIXL1Q9H2W2 232 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 PLSCR3Q9NRY6 295 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 SDHAF2Q9NX18 166 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 EXTL2Q9UBQ6 330 aa7.49□□□□□ -1.21
CLCN3-205ENST00000506924 H0YJW9 148 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 M0QZK8 103 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 CD28P10747 220 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 AADACP22760 399 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 HLA-DMAP28067 261 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 FCGR2CP31995 323 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 CBX5P45973 191 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 RFX2P48378 723 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 LUMP51884 338 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-205ENST00000506924 FHL2Q14192 279 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 FAM71F2Q6NXP2 309 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 CENPVQ7Z7K6 275 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-205ENST00000506924 LAX1Q8IWV1 398 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 RASL11BQ9BPW5 248 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 HSPB9Q9BQS6 159 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 TOLLIPQ9H0E2 274 aa7.48□□□□□ -1.21
CLCN3-205ENST00000506924 FGF16O43320 207 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 NXPH3O95157 252 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 DIRAS3O95661 229 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 IGKV1-16P04430 117 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 CTXN2P0C2S0 81 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 OR5H8P0DN80 308 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 FXYD4P59646 89 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms