RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 COPZ2Q9P299 210 aa11.82□□□□□ -0.52
DSP-203ENST00000506617 MMP24Q9Y5R2 645 aa11.82□□□□□ -0.52
DSP-203ENST00000506617 LINC00473A8K010 186 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 OR2F2O95006 317 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 NDUFB6O95139 128 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
DSP-203ENST00000506617 PGAM2P15259 253 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 LGALS7P47929 136 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 DEFA1P59665 94 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 DEFA3P59666 94 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 CBX3Q13185 183 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 ABCA11PQ4W5N1 156 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 CCBE1Q6UXH8 406 aaPredicted RBP11.81□□□□□ -0.52
DSP-203ENST00000506617 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 CADM3Q8N126 398 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 CCDC71LQ8N9Z2 235 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 CAPSLQ8WWF8 208 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 EAF1Q96JC9 268 aaPredicted RBP11.81□□□□□ -0.52
DSP-203ENST00000506617 RBM14Q96PK6 669 aaKnown RBP11.81□□□□□ -0.52
DSP-203ENST00000506617 BEX1Q9HBH7 125 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 TBC1D24Q9ULP9 559 aa11.81□□□□□ -0.52
DSP-203ENST00000506617 C14orf166Q9Y224 244 aaKnown RBP11.81□□□□□ -0.52
DSP-203ENST00000506617 A0A1B0GUS0 222 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 MPPED1O15442 326 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 IGKV1D-33P01593 117 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 IGKV1-33P01594 117 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 F2RP25116 425 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 BTCP35070 178 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
DSP-203ENST00000506617 IFITM3Q01628 133 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 POC5Q8NA72 575 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 DRAXINQ8NBI3 349 aaPredicted RBP11.8□□□□□ -0.52
DSP-203ENST00000506617 NPBQ8NG41 125 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 LINC01006Q8NI28 216 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
DSP-203ENST00000506617 FLYWCH2Q96CP2 140 aaKnown RBP11.8□□□□□ -0.52
DSP-203ENST00000506617 AIFM2Q9BRQ8 373 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 RTBDNQ9BSG5 229 aaPredicted RBP11.8□□□□□ -0.52
DSP-203ENST00000506617 ZNF747Q9BV97 191 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 C5orf66Q9H5L9 145 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 SLC35D1Q9NTN3 355 aa11.8□□□□□ -0.52
DSP-203ENST00000506617 LIN7CQ9NUP9 197 aaKnown RBP11.8□□□□□ -0.52
DSP-203ENST00000506617 CLPSL1A2RUU4 121 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 FGF16O43320 207 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 TSPAN9O75954 239 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 SPDEFO95238 335 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 TMEM11P17152 192 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 PIGPP57054 158 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 RPL30P62888 115 aaKnown RBP11.79□□□□□ -0.52
DSP-203ENST00000506617 C11orf88Q6PI97 169 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 OR4S2Q8NH73 311 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 C16orf95Q9H693 158 aa11.79□□□□□ -0.52
DSP-203ENST00000506617 PIGBOS1A0A0B4J2F0 54 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 H7C2Y5 167 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 RPA2P15927 270 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 CD24P25063 80 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 TAS2R31P59538 309 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 HES1Q14469 280 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 FBLN7Q53RD9 439 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 TBC1D26Q86UD7 250 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
DSP-203ENST00000506617 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
DSP-203ENST00000506617 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 PLSCR3Q9NRY6 295 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 VSIG4Q9Y279 399 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 RNF114Q9Y508 228 aa11.78□□□□□ -0.52
DSP-203ENST00000506617 IGHV3-72A0A0B4J1Y9 119 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 H0Y980 276 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 TNFSF12O43508 249 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 NDUFA3O95167 84 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 HPRT1P00492 218 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 IGKV1-16P04430 117 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 RLN1P04808 185 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 FGF2P09038 288 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 CCR6P51684 374 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 PROK1P58294 105 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 LINC00205P59089 165 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 DHODHQ02127 395 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
DSP-203ENST00000506617 PHLDA2Q53GA4 152 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 GLDNQ6ZMI3 551 aaPredicted RBP11.77□□□□□ -0.53
DSP-203ENST00000506617 SPAG16Q8N0X2 631 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 NPFFR1Q9GZQ6 430 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 RANBP3Q9H6Z4 567 aaPredicted RBP11.77□□□□□ -0.53
DSP-203ENST00000506617 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 MOB4Q9Y3A3 225 aa11.77□□□□□ -0.53
DSP-203ENST00000506617 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
DSP-203ENST00000506617 FAM240BA0A1B0GVZ2 78 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms