RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
MATR3-211ENST00000505625 OR4C5Q8NGB2 326 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 F11RQ9Y624 299 aaKnown RBP4.45□□□□□ -1.7
MATR3-211ENST00000505625 NACAE9PAV3 2078 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 TEX48A0A1B0GUV7 120 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 LY6HO94772 140 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 CELA3AP09093 270 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 WNT2P09544 360 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 RPL18AQ02543 176 aaKnown RBP4.45□□□□□ -1.7
MATR3-211ENST00000505625 MLLT11Q13015 90 aaPredicted RBP4.45□□□□□ -1.7
MATR3-211ENST00000505625 SLC51BQ86UW2 128 aa4.45□□□□□ -1.7
MATR3-211ENST00000505625 UPK3AO75631 287 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 RPL12P30050 165 aaKnown RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 DEFB105AQ8NG35 78 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 MOSP00540 346 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 PSG2P11465 335 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 DAPP51397 102 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 RELAQ04206 551 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZNF383Q8NA42 475 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZNRF1Q8ND25 227 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 WDFY2Q96P53 400 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 MPC1Q9Y5U8 109 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 TUBGCP6Q96RT7 1819 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 BRCA1P38398 1863 aaKnown RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 RBFOX2O43251 390 aaKnown RBP eCLIP4.44□□□□□ -1.7
MATR3-211ENST00000505625 IL6RP08887 468 aaPredicted RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 HIST1H1BP16401 226 aaKnown RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 RPL29P47914 159 aaKnown RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 PNRC1Q12796 327 aaPredicted RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 DEGS2Q6QHC5 323 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 PIP4P2Q8N4L2 257 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 C12orf57Q99622 126 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 LINC00470Q9BZP3 86 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 A0A0A6YYD5 115 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 G3V2L1 256 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 HBZP02008 142 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 OR10J1P30954 320 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 DCTDP32321 178 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 LHFPL4Q7Z7J7 247 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 PACRGLQ8N7B6 248 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 RPRMQ9NS64 109 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 TREX1Q9NSU2 369 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 TMEM38BQ9NVV0 291 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 TNFSF18Q9UNG2 199 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 COL5A3P25940 1745 aaPredicted RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZNF561-AS1K7EIQ3 104 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 IFNL4K9M1U5 179 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 CD74P04233 296 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 FAM162BQ5T6X4 162 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZIC4Q8N9L1 334 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 OR10AC1Q8NH08 325 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 GTSF1Q8WW33 167 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 OR10C1Q96KK4 312 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZNF385AQ96PM9 386 aaKnown RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 FIZ1Q96SL8 496 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZFP30Q9Y2G7 519 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 TMEM272A0A1B0GTI8 110 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 H3BUX3 64 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 GZMHP20718 246 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 UBE2E1P51965 193 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 B2MP61769 119 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 KLF9Q13886 244 aaPredicted RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 P2RY6Q15077 328 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 CCBE1Q6UXH8 406 aaPredicted RBP4.44□□□□□ -1.7
MATR3-211ENST00000505625 ZNF818PQ6ZRF7 136 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 CBLL1Q75N03 491 aa4.44□□□□□ -1.7
MATR3-211ENST00000505625 LOC390937A0A1W2PQ73 354 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 OR11H12B2RN74 326 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 M0R2N4 97 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 CST2P09228 141 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 MMP9P14780 707 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 KLF14Q8TD94 323 aaPredicted RBP4.43□□□□□ -1.7
MATR3-211ENST00000505625 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 ST6GAL2Q96JF0 529 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 WFIKKN1Q96NZ8 548 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 IGLL5B9A064 214 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 EFEMP2O95967 443 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 LEPP41159 167 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 MRPS10P82664 201 aaKnown RBP4.43□□□□□ -1.7
MATR3-211ENST00000505625 INSL4Q14641 139 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 HOGA1Q86XE5 327 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 RNF166Q96A37 237 aaPredicted RBP4.43□□□□□ -1.7
MATR3-211ENST00000505625 C10orf90Q96M02 699 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 ATP6V0BQ99437 205 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 KIR2DL4Q99706 377 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 NTN4Q9HB63 628 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 DOCK8Q8NF50 2099 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 WDR54Q9H977 334 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 RTTNQ86VV8 2226 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 IGKV1D-12P01611 117 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 CISD3P0C7P0 127 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 MYOD1P15172 320 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 TNFSF10P50591 281 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 LEMD1Q68G75 181 aa4.43□□□□□ -1.7
MATR3-211ENST00000505625 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms