RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 H3BP45 60 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 CCL21O00585 134 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 TFF1P04155 84 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 NDUFB7P17568 137 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 PPOXP50336 477 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 LTC4SQ16873 150 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 TMEM41BQ5BJD5 291 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 OR2B11Q5JQS5 317 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 ZNF709Q8N972 641 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 MBD3L1Q8WWY6 194 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
NFKB1-205ENST00000505458 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 USF3Q68DE3 2245 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 TMPRSS2O15393 492 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 NXPH3O95157 252 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 APOA2P02652 100 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 IL3RAP26951 378 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 RAB11AP62491 216 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 RPL31P62899 125 aaKnown RBP9.35□□□□□ -0.91
NFKB1-205ENST00000505458 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 DEFB108BQ8NET1 73 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 DSCAMO60469 2012 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 E7EQL1 145 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 HSPB1P04792 205 aaKnown RBP9.35□□□□□ -0.91
NFKB1-205ENST00000505458 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 PAX6P26367 422 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 KHDC3LQ587J8 217 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 CT45A1Q5HYN5 189 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 CT45A3Q8NHU0 189 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 TNFRSF14Q92956 283 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
NFKB1-205ENST00000505458 ZNF257Q9Y2Q1 563 aa9.35□□□□□ -0.91
NFKB1-205ENST00000505458 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 FAM157AC9JC47 383 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 IFNA17P01571 189 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 HFEQ30201 348 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 DMRTC2Q8IXT2 367 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 ZNF596Q8TC21 504 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 ENY2Q9NPA8 101 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 ANKRD11Q6UB99 2663 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 FNDC10F2Z333 226 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 ARG1P05089 322 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 OR2B8PP59922 312 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 ZNF506Q5JVG8 444 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 IGHV1-69-2A0A0G2JMI3 117 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 C15orf61A6NNL5 157 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 TNFRSF13BO14836 293 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-205ENST00000505458 AGPAT2O15120 278 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 AKR1C1Q04828 323 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 RHEBQ15382 184 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 LYG1Q8N1E2 194 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 CLRN3Q8NCR9 226 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 OR4C12Q96R67 309 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 TMEM140Q9NV12 185 aa9.34□□□□□ -0.91
NFKB1-205ENST00000505458 DNASE2O00115 360 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 RBP4P02753 201 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 PPT1P50897 306 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 DLK1P80370 383 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 TCF23Q7RTU1 214 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 TMEM186Q96B77 213 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 NEIL1Q96FI4 390 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 H7C2Y5 167 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 NFYBP25208 207 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 ZNF833PQ6ZTB9 187 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 OR4A5Q8NH83 315 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 P2RX4Q99571 388 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 TMEM231Q9H6L2 316 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 RP1L1Q8IWN7 2480 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 A0A087X0M5 115 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 A0A1B0GX30 115 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 HOXA4Q00056 320 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 RELBQ01201 579 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 RPL39P5Q59GN2 51 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 SP5Q6BEB4 398 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 HAPLN4Q86UW8 402 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-205ENST00000505458 VSTM2AQ8TAG5 236 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 PCGF1Q9BSM1 259 aa9.33□□□□□ -0.92
NFKB1-205ENST00000505458 PROP1O75360 226 aa9.32□□□□□ -0.92
NFKB1-205ENST00000505458 ZNF134P52741 427 aa9.32□□□□□ -0.92
NFKB1-205ENST00000505458 RUNX1Q01196 453 aa9.32□□□□□ -0.92
NFKB1-205ENST00000505458 OR8G2PQ6IF36 304 aa9.32□□□□□ -0.92
NFKB1-205ENST00000505458 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
NFKB1-205ENST00000505458 RBMS3Q6XE24 437 aaKnown RBP9.32□□□□□ -0.92
NFKB1-205ENST00000505458 SCRT1Q9BWW7 348 aa9.32□□□□□ -0.92
NFKB1-205ENST00000505458 MS4A7Q9GZW8 240 aaPredicted RBP9.32□□□□□ -0.92
NFKB1-205ENST00000505458 CISD1Q9NZ45 108 aaKnown RBP9.32□□□□□ -0.92
NFKB1-205ENST00000505458 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms