RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 SLC9A3R2Q15599 337 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 DHRS7BQ6IAN0 325 aaPredicted RBP11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 PDPNQ86YL7 162 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 OR4S2Q8NH73 311 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 CFHR4Q92496 578 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 TP53RKQ96S44 253 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 SSX3Q99909 188 aa11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 GPN1Q9HCN4 374 aaPredicted RBP11.14□□□□□ -0.63
CYSTM1-202ENST00000504227 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 FAM90A9PA6NNJ1 464 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 INAFM1C9JVW0 142 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 VENTXO95231 258 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 CRYZL1O95825 349 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 MOSP00540 346 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 HLA-AP01891 365 aaKnown RBP11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 RPS16P62249 146 aaKnown RBP11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 HES1Q14469 280 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 OR4C13Q8NGP0 309 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM222Q9H0R3 208 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 PRDM13Q9H4Q3 707 aa11.13□□□□□ -0.63
CYSTM1-202ENST00000504227 MXRA5Q9NR99 2828 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 BTBD17A6NE02 478 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 SHOXO15266 292 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 RAMP3O60896 148 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 ATG12O94817 140 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 DUS4LO95620 317 aaKnown RBP11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 HPRT1P00492 218 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 HRASP01112 189 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 IGKV1D-33P01593 117 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 IGKV1-33P01594 117 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 SNRNP70P08621 437 aaKnown RBP11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 RPA2P15927 270 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 CD24P25063 80 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 UCP1P25874 307 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 BRWD1-AS2P59051 145 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 SRPXP78539 464 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 DHRS2Q13268 280 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM187Q14656 261 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 Q6YL49 198 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 LGI3Q8N145 548 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 ZNF431Q8TF32 576 aaPredicted RBP11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 RNF5Q99942 180 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 SEC22CQ9BRL7 303 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 AIFM2Q9BRQ8 373 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 PLEKHA2Q9HB19 425 aa11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
CYSTM1-202ENST00000504227 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 H3BUX3 64 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM11P17152 192 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 IER3P46695 156 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 LGALS7P47929 136 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 EBI3Q14213 229 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 HNF4GQ14541 408 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM177Q53S58 311 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 ZNF695Q8IW36 515 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 OR5R1Q8NH85 324 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 SSMEM1Q8WWF3 244 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 PHB2Q99623 299 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 COMMD9Q9P000 198 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 PITPNC1Q9UKF7 332 aa11.11□□□□□ -0.63
CYSTM1-202ENST00000504227 CREBL2O60519 120 aaPredicted RBP11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 S1PR2O95136 353 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 CDS2O95674 445 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 NQO2P16083 231 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 ERVK-16P61578 105 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 SELENOHQ8IZQ5 122 aaKnown RBP11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 C12orf45Q8N5I9 185 aaPredicted RBP11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 OR52B4Q8NGK2 314 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 IL22RA2Q969J5 263 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 HARBI1Q96MB7 349 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 TMEM56-RWDD3S4R434 201 aa11.1□□□□□ -0.63
CYSTM1-202ENST00000504227 FN1P02751 2386 aaKnown RBP11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 A0A0A6YYJ9 748 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 A0A0B4J2A0 478 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 CRLF1O75462 422 aa11.09□□□□□ -0.63
CYSTM1-202ENST00000504227 KRASP01116 189 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms