RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 MALSU1Q96EH3 234 aa12.25□□□□□ -0.45
SGCA-204ENST00000504073 ZNF251Q9BRH9 671 aa12.25□□□□□ -0.45
SGCA-204ENST00000504073 ARHGAP32A7KAX9 2087 aa12.25□□□□□ -0.45
SGCA-204ENST00000504073 ACANP16112 2415 aa12.25□□□□□ -0.45
SGCA-204ENST00000504073 LINC00473A8K010 186 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 RNASEK-C17orf49H0YIS7 233 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 NPFFO15130 113 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 PET100P0DJ07 73 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 CT45A6P0DMU7 189 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 CT45A5P0DMU8 189 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 CT45A7P0DMV0 189 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 IGHV4-31P0DP07 118 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 BRS3P32247 399 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 RPL30P62888 115 aaKnown RBP12.24□□□□□ -0.45
SGCA-204ENST00000504073 KLRD1Q13241 179 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 OR2B11Q5JQS5 317 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 KRTAP1-3Q8IUG1 177 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 SLC35G3Q8N808 338 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 DRAXINQ8NBI3 349 aaPredicted RBP12.24□□□□□ -0.45
SGCA-204ENST00000504073 WFDC11Q8NEX6 87 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 DMBX1Q8NFW5 382 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 OR11H7Q8NGC8 314 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 OR4C13Q8NGP0 309 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 OSR1Q8TAX0 266 aaPredicted RBP12.24□□□□□ -0.45
SGCA-204ENST00000504073 FLYWCH2Q96CP2 140 aaKnown RBP12.24□□□□□ -0.45
SGCA-204ENST00000504073 C18orf12Q96KH6 178 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 C2orf50Q96LR7 162 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 GPHA2Q96T91 129 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 NABP2Q9BQ15 211 aa12.24□□□□□ -0.45
SGCA-204ENST00000504073 MRPL20Q9BYC9 149 aaKnown RBP12.24□□□□□ -0.45
SGCA-204ENST00000504073 IGHV1-69DA0A0B4J2H0 117 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 SHOXO15266 292 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 SNAPC5O75971 98 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 CRYZL1O95825 349 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 IGHV1-69P01742 117 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 SLC25A6P12236 298 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 SMCO1Q147U7 214 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 GGNBP1Q5YKI7 109 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 H2BFWTQ7Z2G1 175 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 VSTM2AQ8TAG5 236 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 DDB2Q92466 427 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 R3HDM4Q96D70 268 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 C5orf30Q96GV9 206 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 CHIAQ9BZP6 476 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 NMES1Q9C002 83 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
SGCA-204ENST00000504073 FAM96BQ9Y3D0 163 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
SGCA-204ENST00000504073 TRAV40A0A0B4J280 105 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 IGHV1-3A0A0C4DH29 117 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 A0A1B0GU03 582 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 H0YJW9 148 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 PROP1O75360 226 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 RLN2P04090 185 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 LGALS7P47929 136 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 REG1BP48304 166 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 IAH1Q2TAA2 248 aaPredicted RBP12.22□□□□□ -0.45
SGCA-204ENST00000504073 UTF1Q5T230 341 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 HCP5Q6MZN7 132 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 LYZL2Q7Z4W2 148 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 PDZD9Q8IXQ8 264 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 TCTE3Q8IZS6 198 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 TSNAXQ99598 290 aaKnown RBP12.22□□□□□ -0.45
SGCA-204ENST00000504073 RNF5Q99942 180 aa12.22□□□□□ -0.45
SGCA-204ENST00000504073 PRRC2AP48634 2157 aaKnown RBP12.21□□□□□ -0.45
SGCA-204ENST00000504073 CENPVL3A0A0U1RRI6 287 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 FAM90A9PA6NNJ1 464 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 LY6LH3BQJ8 138 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 CCSO14618 274 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 RBMXL2O75526 392 aaKnown RBP12.21□□□□□ -0.45
SGCA-204ENST00000504073 ADAP1O75689 374 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 OR2A4O95047 310 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 S1PR2O95136 353 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 KRASP01116 189 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 CXCL3P19876 107 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 CD1BP29016 333 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 RPS16P62249 146 aaKnown RBP12.21□□□□□ -0.45
SGCA-204ENST00000504073 VMA21Q3ZAQ7 101 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 ZNF585BQ52M93 769 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 OR1S1Q8NH92 325 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 NANPQ8TBE9 248 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 OR2A7Q96R45 310 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 PRR13Q9NZ81 148 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 GSKIPQ9P0R6 139 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 ZNRD1Q9P1U0 126 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.45
SGCA-204ENST00000504073 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.21□□□□□ -0.46
SGCA-204ENST00000504073 A0A1W2PRD5 423 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 A0A1W2PRF3 423 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 A0A1W2PRM7 423 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 WRBO00258 174 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 RAMP3O60896 148 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 HNRNPCP07910 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
SGCA-204ENST00000504073 PVALBP20472 110 aaPredicted RBP12.2□□□□□ -0.46
SGCA-204ENST00000504073 SAA4P35542 130 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 DLX1P56177 255 aa12.2□□□□□ -0.46
SGCA-204ENST00000504073 SRSF4Q08170 494 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms