RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 DDB2Q92466 427 aa18.55■□□□□ 0.56
PCDH1-204ENST00000503492 TAF15Q92804 592 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCDH1-204ENST00000503492 CIB3Q96Q77 187 aaPredicted RBP18.55■□□□□ 0.56
PCDH1-204ENST00000503492 VKORC1Q9BQB6 163 aa18.55■□□□□ 0.56
PCDH1-204ENST00000503492 CEBPZOSA8MTT3 80 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 GFRA3O60609 400 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 HAGHQ16775 308 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 S1PR3Q99500 378 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 SMDT1Q9H4I9 107 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 MMP23AO75900 390 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 RPS16P62249 146 aaKnown RBP18.54■□□□□ 0.56
PCDH1-204ENST00000503492 TLE1Q04724 770 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 AKIRIN2Q53H80 203 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 VKORC1L1Q8N0U8 176 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 ZNF439Q8NDP4 499 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 IDI2-AS1Q9NZ38 188 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 PRELID3BQ9Y3B1 194 aa18.54■□□□□ 0.56
PCDH1-204ENST00000503492 ROS1P08922 2347 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 SAA2-SAA4A0A096LPE2 208 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 ZNF729A6NN14 1252 aaPredicted RBP18.53■□□□□ 0.56
PCDH1-204ENST00000503492 TMPRSS2O15393 492 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 HBE1P02100 147 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 SAA2P0DJI9 122 aaPredicted RBP18.53■□□□□ 0.56
PCDH1-204ENST00000503492 HFEQ30201 348 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 AARDQ4LEZ3 155 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 CORO2AQ92828 525 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 ZNF251Q9BRH9 671 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 AIFM2Q9BRQ8 373 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 LINC00574Q9H8X3 128 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 RAXQ9Y2V3 346 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 TRAV1-1A0A0B4J248 108 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 SERF2P84101 59 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 ZNF726P1Q15940 193 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 PRAMEF5Q5TYX0 476 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 SAP30LQ9HAJ7 183 aa18.53■□□□□ 0.56
PCDH1-204ENST00000503492 TRGV8A0A0C4DH27 118 aa18.52■□□□□ 0.56
PCDH1-204ENST00000503492 FAM90A9PA6NNJ1 464 aa18.52■□□□□ 0.56
PCDH1-204ENST00000503492 RBMXL1Q96E39 390 aaKnown RBP18.52■□□□□ 0.56
PCDH1-204ENST00000503492 SHISA9B4DS77 424 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 AKR1C3P42330 323 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 ATP6V1FQ16864 119 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 AWAT1Q58HT5 328 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 DMRTC2Q8IXT2 367 aaPredicted RBP18.52■□□□□ 0.55
PCDH1-204ENST00000503492 OR10P1Q8NGE3 313 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 CLDND2Q8NHS1 167 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 NEUROG1Q92886 237 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 TMEM147Q9BVK8 224 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 NDRG3Q9UGV2 375 aa18.52■□□□□ 0.55
PCDH1-204ENST00000503492 KIR2DS2P43631 304 aa18.51■□□□□ 0.55
PCDH1-204ENST00000503492 RAB2AP61019 212 aa18.51■□□□□ 0.55
PCDH1-204ENST00000503492 ICAM4Q14773 271 aa18.51■□□□□ 0.55
PCDH1-204ENST00000503492 SSX7Q7RTT5 188 aa18.51■□□□□ 0.55
PCDH1-204ENST00000503492 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.51■□□□□ 0.55
PCDH1-204ENST00000503492 TRAV38-1A0A0B4J264 116 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 NKX6-3A6NJ46 265 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 SCAF4O95104 1147 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 IFNA17P01571 189 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 NQO2P16083 231 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 NDUFB7P17568 137 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 GNG10P50151 68 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 ZNF506Q5JVG8 444 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 NCMAPQ5T1S8 102 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 LYG1Q8N1E2 194 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 C20orf24Q9BUV8 137 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 EGLN1Q9GZT9 426 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 NGBQ9NPG2 151 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 TLN1Q9Y490 2541 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 TRAV3A0A0B4J244 114 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 E7EQL1 145 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 SRP19P09132 144 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 ERVK-16P61578 105 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 MRPS11P82912 194 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 HNF4GQ14541 408 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 SMUG1Q53HV7 270 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 KDF1Q8NAX2 398 aaPredicted RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 OR4A16Q8NH70 328 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 MBD3L1Q8WWY6 194 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 RNASE6Q93091 150 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 PINX1Q96BK5 328 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 RCC1LQ96I51 464 aaKnown RBP18.5■□□□□ 0.55
PCDH1-204ENST00000503492 RPS10P5Q9NQ39 176 aa18.5■□□□□ 0.55
PCDH1-204ENST00000503492 C15orf62A8K5M9 175 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 TMEM178BH3BS89 294 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 FCN3O75636 299 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 SNRNP70P08621 437 aaKnown RBP18.49■□□□□ 0.55
PCDH1-204ENST00000503492 ELLP55199 621 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-204ENST00000503492 RELBQ01201 579 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 TMEM41BQ5BJD5 291 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 CENPVQ7Z7K6 275 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-204ENST00000503492 TMEM140Q9NV12 185 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 SLC25A10Q9UBX3 287 aaPredicted RBP18.49■□□□□ 0.55
PCDH1-204ENST00000503492 TIMM9Q9Y5J7 89 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 YLPM1P49750 1951 aaKnown RBP18.49■□□□□ 0.55
PCDH1-204ENST00000503492 hADV38S2A0JD32 116 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 C7orf77A4D0Y5 90 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 VSTM5A8MXK1 200 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 M0R036 132 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 SOHLH1Q5JUK2 328 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 LCN15Q6UWW0 184 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 ZNF383Q8NA42 475 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms