RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 OVOL2Q9BRP0 275 aa11.03□□□□□ -0.64
TRAF4-212ENST00000498540 S100A14Q9HCY8 104 aa11.03□□□□□ -0.64
TRAF4-212ENST00000498540 KMT2AQ03164 3969 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 MYL12BO14950 172 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 MPPED1O15442 326 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 BPNT1O95861 308 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 HLA-AP01891 365 aaKnown RBP11.02□□□□□ -0.65
TRAF4-212ENST00000498540 KIR2DS2P43631 304 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 TMEM50BP56557 158 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 EWSR1Q01844 656 aaKnown RBP eCLIP11.02□□□□□ -0.652e-6■■■■□ 23.3
TRAF4-212ENST00000498540 ATP5G2Q06055 141 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 PRSS8Q16651 343 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 FAM89BQ8N5H3 189 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 CYGBQ8WWM9 190 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 CACNG8Q8WXS5 425 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 PHYHIPQ92561 330 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 HSF4Q9ULV5 492 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 DMRT1Q9Y5R6 373 aa11.02□□□□□ -0.65
TRAF4-212ENST00000498540 HERC2O95714 4834 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 TRDCB7Z8K6 153 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 TUSC2O75896 110 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 CBX3Q13185 183 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 P2RY14Q15391 338 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 RTL8BQ17RB0 113 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 TTC23Q5W5X9 447 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 LAIR2Q6ISS4 152 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 AHSA2Q719I0 299 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 RPP25LQ8N5L8 163 aaKnown RBP11.01□□□□□ -0.65
TRAF4-212ENST00000498540 OR6M1Q8NGM8 313 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 ACOT12Q8WYK0 555 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
TRAF4-212ENST00000498540 ARHGAP5-AS1Q96IT6 56 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 CMSS1Q9BQ75 279 aaKnown RBP11.01□□□□□ -0.65
TRAF4-212ENST00000498540 URM1Q9BTM9 101 aaKnown RBP11.01□□□□□ -0.65
TRAF4-212ENST00000498540 PECRQ9BY49 303 aa11.01□□□□□ -0.65
TRAF4-212ENST00000498540 TECRQ9NZ01 308 aaKnown RBP11.01□□□□□ -0.65
TRAF4-212ENST00000498540 NUPR2A6NF83 97 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 BET1O15155 118 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 CD37P11049 281 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 UBE2KP61086 200 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 C15orf32Q32M92 178 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 VMA21Q3ZAQ7 101 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 IGSF11Q5DX21 431 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 C10orf55Q5SWW7 151 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 SLC16A13Q7RTY0 426 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 NANOGP1Q8N7R0 232 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 TEX45Q8NA69 505 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 SETD9Q8NE22 299 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 DDB2Q92466 427 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 GFI1Q99684 422 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 GGTLC1Q9BX51 225 aa11□□□□□ -0.65
TRAF4-212ENST00000498540 A0A0J9YWU9 116 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 FABP7O15540 132 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 OR2J3O76001 311 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 OR2C1O95371 312 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 CRYZL1O95825 349 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 SERPINB10P48595 397 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 TAGLNQ01995 201 aaKnown RBP10.99□□□□□ -0.65
TRAF4-212ENST00000498540 HSD17B12Q53GQ0 312 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 PLAC9Q5JTB6 97 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 C19orf35Q6ZS72 473 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 CEACAM19Q7Z692 300 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 NECAP1Q8NC96 275 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 OR4A4PQ8NGN8 299 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 CABLES2Q9BTV7 478 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 ZNF430Q9H8G1 570 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-212ENST00000498540 PSORS1C1Q9UIG5 152 aa10.99□□□□□ -0.65
TRAF4-212ENST00000498540 LOC102724200A0A096LPH7 203 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-212ENST00000498540 LINC00473A8K010 186 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 LGALS9O00182 355 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 GGCTO75223 188 aaKnown RBP10.98□□□□□ -0.65
TRAF4-212ENST00000498540 RRASP10301 218 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 CBLN1P23435 193 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 CEMP1Q6PRD7 247 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-212ENST00000498540 TTC9CQ8N5M4 171 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 MS4A15Q8N5U1 240 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 OR52B4Q8NGK2 314 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 PLGRKTQ9HBL7 147 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 MLXQ9UH92 298 aa10.98□□□□□ -0.65
TRAF4-212ENST00000498540 TRBV6-7A0A0A0MS04 114 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 TMEM213A2RRL7 107 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 SLC17A2O00624 439 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 SCAF4O95104 1147 aaKnown RBP10.97□□□□□ -0.65
TRAF4-212ENST00000498540 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 GNAO1P09471 354 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 UCHL1P09936 223 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 GSTT2P0CG29 244 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 GSTT2BP0CG30 244 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 SAA1P0DJI8 122 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-212ENST00000498540 DUTP33316 252 aaKnown RBP10.97□□□□□ -0.65
TRAF4-212ENST00000498540 ZNF57Q68EA5 555 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-212ENST00000498540 LYG2Q86SG7 212 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 C10orf67Q8IYJ2 551 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 OR10J5Q8NHC4 309 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 MAFIPQ8WZ33 124 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 CCDC140Q96MF4 163 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 SPIN2AQ99865 258 aa10.97□□□□□ -0.65
TRAF4-212ENST00000498540 SPIN2BQ9BPZ2 258 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms