RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 MRPL27Q9P0M9 148 aaKnown RBP4.29□□□□□ -1.72
BRCA1-224ENST00000497488 PKIGQ9Y2B9 76 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF706Q9Y5V0 76 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-224ENST00000497488 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-224ENST00000497488 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 LOC102724200A0A096LPH7 203 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 VPS37CA5D8V6 355 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 GMNCA6NCL1 334 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 PPP5D1E7EU14 171 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 TRAF3IP2O43734 574 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 SLC25A14O95258 325 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 SERPINB1P30740 379 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 UBE2AP49459 152 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 MNAT1P51948 309 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 CRIP2P52943 208 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 CTBP2P56545 445 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 TSNQ15631 228 aaKnown RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 SNRNP35Q16560 246 aaKnown RBP4.28□□□□□ -1.72
BRCA1-224ENST00000497488 KRTAP24-1Q3LI83 254 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 C1orf194Q5T5A4 169 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 GUSBP11Q6P575 273 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 ATP5L2Q7Z4Y8 100 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF567Q8N184 647 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 DEFB125Q8N687 156 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 LINC01555Q8NAE3 123 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 TMEM35BQ8NCS4 154 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF555Q8NEP9 628 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 RHOXF1Q8NHV9 184 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 VGLL1Q99990 258 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 LINC00527Q9UJ94 153 aa4.28□□□□□ -1.72
BRCA1-224ENST00000497488 IGHV3-72A0A0B4J1Y9 119 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 EXOC1LA0A1B0GW35 172 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 OR5H1A6NKK0 313 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 F5H5P2 479 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 FAAHO00519 579 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 ATG12O94817 140 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 S1PR2O95136 353 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 IGHV3-11P01762 117 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 CTSEP14091 401 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 CTLA4P16410 223 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 MPIP34949 423 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 RAP1AP62834 184 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 ELOCQ15369 112 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 LPCAT3Q6P1A2 487 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 SMARCD3Q6STE5 483 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 UBL4BQ8N7F7 174 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 SLC25A29Q8N8R3 303 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 OR9I1Q8NGQ6 314 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 OR10K1Q8NGX5 313 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 OR2T4Q8NH00 348 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 OR51H1Q8NH63 302 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 OR10A6Q8NH74 314 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 COQ8AQ8NI60 647 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 FAM57AQ8TBR7 257 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 ANKRD36BP1Q96IX9 119 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 ULBP3Q9BZM4 244 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 EIF5A2Q9GZV4 153 aaKnown RBP4.27□□□□□ -1.73
BRCA1-224ENST00000497488 MIXL1Q9H2W2 232 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 C12orf10Q9HB07 376 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 NEU3Q9UQ49 428 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 UTP11Q9Y3A2 253 aaKnown RBP4.27□□□□□ -1.73
BRCA1-224ENST00000497488 LOXHD1Q8IVV2 1947 aa4.27□□□□□ -1.73
BRCA1-224ENST00000497488 KIAA1671Q9BY89 1806 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 VCANP13611 3396 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 MYH9P35579 1960 aaKnown RBP4.26□□□□□ -1.73
BRCA1-224ENST00000497488 IGHV5-51A0A0C4DH38 117 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 A0A0J9YWU9 116 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 ZNF729A6NN14 1252 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-224ENST00000497488 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 SOCS1O15524 211 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 PDE6DO43924 150 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 FAM228BP0C875 321 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 OR13C7P0DN81 318 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 OR12D1P0DN82 309 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 KLK2P20151 261 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 RWDD2BP57060 319 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 EIF4EBP2Q13542 120 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-224ENST00000497488 IAH1Q2TAA2 248 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-224ENST00000497488 HIGD2BQ4VC39 106 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 ABCA11PQ4W5N1 156 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 CYHR1Q6ZMK1 362 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 FA2HQ7L5A8 372 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 SLC16A13Q7RTY0 426 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 MARCH3Q86UD3 253 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 TMEM75Q8N9X5 138 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 OR2M3Q8NG83 312 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 OR51A2Q8NGJ7 313 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 OR2K2Q8NGT1 345 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 HDHD3Q9BSH5 251 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-224ENST00000497488 MARVELD1Q9BSK0 173 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 CXCL16Q9H2A7 254 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 NOX3Q9HBY0 568 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 ZNF225Q9UK10 706 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 OR51B4Q9Y5P0 310 aa4.26□□□□□ -1.73
BRCA1-224ENST00000497488 ATG2AQ2TAZ0 1938 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 IGLV11-55A0A075B6I3 123 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 A0A1B0GV50 99 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 C9JQL5 133 aa4.25□□□□□ -1.73
BRCA1-224ENST00000497488 C5orf67F2Z3F1 127 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms