RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 GLRXP35754 106 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 GNG5P63218 68 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 PSPHP78330 225 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 EBI3Q14213 229 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 C12orf74Q32Q52 190 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 SMARCD3Q6STE5 483 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 GOLT1AQ6ZVE7 132 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 C12orf45Q8N5I9 185 aaPredicted RBP2.96□□□□□ -1.93
SNX13-211ENST00000496855 OR11H6Q8NGC7 330 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 SGMS2Q8NHU3 365 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 ZNF721Q8TF20 911 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 C2orf15Q8WU43 125 aaKnown RBP2.96□□□□□ -1.93
SNX13-211ENST00000496855 ABHD14BQ96IU4 210 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 ZNF382Q96SR6 550 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 ZNF2Q9BSG1 426 aaPredicted RBP2.96□□□□□ -1.93
SNX13-211ENST00000496855 CISHQ9NSE2 258 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 ZNF586Q9NXT0 402 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 C21orf62Q9NYP8 219 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 DHCR7Q9UBM7 475 aaKnown RBP2.96□□□□□ -1.93
SNX13-211ENST00000496855 SLC23A2Q9UGH3 650 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 RSL24D1Q9UHA3 163 aaKnown RBP2.96□□□□□ -1.93
SNX13-211ENST00000496855 PYCARDQ9ULZ3 195 aa2.96□□□□□ -1.93
SNX13-211ENST00000496855 PTPRTO14522 1441 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 DCCP43146 1447 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 SVILO95425 2214 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 MYH3P11055 1940 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 DENND4BO75064 1496 aaPredicted RBP2.96□□□□□ -1.94
SNX13-211ENST00000496855 GAPVD1Q14C86 1478 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 TRAPPC13A5PLN9 417 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 NKX2-6A6NCS4 301 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 IZUMO1RA6ND01 250 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 A8MUN3 132 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 H3BSA7 217 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 LST1O00453 97 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 HLA-DRB1P01911 266 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 HLA-DQB1P01920 261 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 OR56A5P0C7T3 313 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 CPMP14384 443 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 GABRA3P34903 492 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 BSPH1Q075Z2 132 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 MMDQ15546 238 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 EXOC3-AS1Q8N2X6 119 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 STX19Q8N4C7 294 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 GRPEL2Q8TAA5 225 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 LMX1AQ8TE12 382 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 MAFIPQ8WZ33 124 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 RNASE6Q93091 150 aaKnown RBP2.96□□□□□ -1.94
SNX13-211ENST00000496855 NARS2Q96I59 477 aaKnown RBP2.96□□□□□ -1.94
SNX13-211ENST00000496855 CNBD2Q96M20 576 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 SHANK2-AS3Q9BTD1 123 aa2.96□□□□□ -1.94
SNX13-211ENST00000496855 C6orf62Q9GZU0 229 aaPredicted RBP2.96□□□□□ -1.94
SNX13-211ENST00000496855 NCOA3Q9Y6Q9 1424 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 MYO5BQ9ULV0 1848 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 DIP2BQ9P265 1576 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 PTPRMP28827 1452 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 ARHGEF10O15013 1369 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 DOCK8Q8NF50 2099 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 IGHV3-43A0A0B4J1X8 118 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 TMEM223A0PJW6 202 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 MED6O75586 246 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 PIAS1O75925 651 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 ZNF682O95780 498 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 MT-CO2P00403 227 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 PPBPP02775 128 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 SERPINE1P05121 402 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 CRABP1P29762 137 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 CXCL12P48061 93 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 TCTAP57738 103 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 SURF2Q15527 256 aaPredicted RBP2.95□□□□□ -1.94
SNX13-211ENST00000496855 TBPL2Q6SJ96 375 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 EIF4E3Q8N5X7 224 aaKnown RBP2.95□□□□□ -1.94
SNX13-211ENST00000496855 ANKRD29Q8N6D5 301 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 ZNF283Q8N7M2 679 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 ZFP62Q8NB50 900 aaPredicted RBP2.95□□□□□ -1.94
SNX13-211ENST00000496855 OR52N1Q8NH53 320 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 DYDC1Q8WWB3 177 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 GNPNAT1Q96EK6 184 aaPredicted RBP2.95□□□□□ -1.94
SNX13-211ENST00000496855 RMND5BQ96G75 393 aaPredicted RBP2.95□□□□□ -1.94
SNX13-211ENST00000496855 CCL13Q99616 98 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 NUP160Q12769 1436 aa2.95□□□□□ -1.94
SNX13-211ENST00000496855 ABCC10Q5T3U5 1492 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 A0A1W2PRE2 83 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 IGSF23A1L1A6 192 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 A8MWL6 223 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 TSTD3H0UI37 97 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 OR5AC1P0C628 307 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 FLI1Q01543 452 aaPredicted RBP2.94□□□□□ -1.94
SNX13-211ENST00000496855 TNFAIP8L3Q5GJ75 292 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 ZFP1Q6P2D0 407 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 BAP18Q8IXM2 172 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 PACRGLQ8N7B6 248 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 GDPD1Q8N9F7 314 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 CT55Q8WUE5 264 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 GPR82Q96P67 336 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 MIA2Q96PC5 1412 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 C1orf50Q9BV19 199 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 SETD5Q9C0A6 1442 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 LINC00574Q9H8X3 128 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 PARVBQ9HBI1 364 aa2.94□□□□□ -1.94
SNX13-211ENST00000496855 LRTM1Q9HBL6 345 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms