RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 OR4S2Q8NH73 311 aa17.43■□□□□ 0.38
C9orf3-222ENST00000496567 FLYWCH2Q96CP2 140 aaKnown RBP17.43■□□□□ 0.38
C9orf3-222ENST00000496567 RNF5Q99942 180 aa17.43■□□□□ 0.38
C9orf3-222ENST00000496567 TCRBP04435 133 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 HNF4GQ14541 408 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 OR2B11Q5JQS5 317 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 C11orf88Q6PI97 169 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 TMED4Q7Z7H5 227 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 SPAG16Q8N0X2 631 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 MINDY2Q8NBR6 621 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 RAB18Q9NP72 206 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 ESM1Q9NQ30 184 aa17.42■□□□□ 0.38
C9orf3-222ENST00000496567 FAM212BQ9NTI7 297 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-222ENST00000496567 NIPBLQ6KC79 2804 aaeCLIP17.41■□□□□ 0.38
C9orf3-222ENST00000496567 TEX13DA0A0J9YY54 714 aaPredicted RBP17.41■□□□□ 0.38
C9orf3-222ENST00000496567 RBFOX2O43251 390 aaKnown RBP eCLIP17.41■□□□□ 0.38
C9orf3-222ENST00000496567 B3GALNT1O75752 331 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 IGKV1-16P04430 117 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 C16orf82Q7Z2V1 217 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 SGPP2Q8IWX5 399 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 Q8N6K4 173 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 ADAD2Q8NCV1 583 aaKnown RBP17.41■□□□□ 0.38
C9orf3-222ENST00000496567 OR8H1Q8NGG4 311 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 RBM14Q96PK6 669 aaKnown RBP17.41■□□□□ 0.38
C9orf3-222ENST00000496567 DUX5Q96PT3 197 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 CHIAQ9BZP6 476 aa17.41■□□□□ 0.38
C9orf3-222ENST00000496567 A0A1B0GVG6 124 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 CRYM-AS1A6NIL9 109 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 OR2F2O95006 317 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 CRYZL1O95825 349 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 AKR1C4P17516 323 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 TAS2R31P59538 309 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 RPS16P62249 146 aaKnown RBP17.4■□□□□ 0.38
C9orf3-222ENST00000496567 TMEM177Q53S58 311 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 CCBE1Q6UXH8 406 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-222ENST00000496567 TMEM219Q86XT9 240 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 LURAP1LQ8IV03 231 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 OSR1Q8TAX0 266 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-222ENST00000496567 C20orf85Q9H1P6 137 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 NAA60Q9H7X0 242 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 C3orf85A0A1B0GTC6 90 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 ARPC1BO15143 372 aaKnown RBP17.4■□□□□ 0.38
C9orf3-222ENST00000496567 LGALS7P47929 136 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 BRWD1-AS2P59051 145 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 TMEM128Q5BJH2 165 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 Q6ZNX1 250 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 DUSP18Q8NEJ0 188 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 SLC25A33Q9BSK2 321 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 C1RLQ9NZP8 487 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 KCNIP3Q9Y2W7 256 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 NUBP2Q9Y5Y2 271 aa17.4■□□□□ 0.38
C9orf3-222ENST00000496567 H0Y980 276 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 SHOXO15266 292 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 RNASE1P07998 156 aaKnown RBP17.39■□□□□ 0.37
C9orf3-222ENST00000496567 UBE2MP61081 183 aaKnown RBP17.39■□□□□ 0.37
C9orf3-222ENST00000496567 FBLN7Q53RD9 439 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 SLC25A42Q86VD7 318 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 TMEM230Q96A57 120 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 HARBI1Q96MB7 349 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 TSNAXQ99598 290 aaKnown RBP17.39■□□□□ 0.37
C9orf3-222ENST00000496567 NUDT15Q9NV35 164 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 FLVCR2Q9UPI3 526 aa17.39■□□□□ 0.37
C9orf3-222ENST00000496567 RAMP3O60896 148 aa17.38■□□□□ 0.37
C9orf3-222ENST00000496567 HPRT1P00492 218 aa17.38■□□□□ 0.37
C9orf3-222ENST00000496567 UBA52P62987 128 aaKnown RBP17.38■□□□□ 0.37
C9orf3-222ENST00000496567 MMDQ15546 238 aa17.38■□□□□ 0.37
C9orf3-222ENST00000496567 RBMXL1Q96E39 390 aaKnown RBP17.38■□□□□ 0.37
C9orf3-222ENST00000496567 AIFM2Q9BRQ8 373 aa17.38■□□□□ 0.37
C9orf3-222ENST00000496567 MOB4Q9Y3A3 225 aa17.38■□□□□ 0.37
C9orf3-222ENST00000496567 NCBP2LA6PVI3 153 aaKnown RBP17.37■□□□□ 0.37
C9orf3-222ENST00000496567 TRIM77I1YAP6 450 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 M0QZK8 103 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 SERPINE2P07093 398 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 GALNT14Q96FL9 552 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 RITA1Q96K30 269 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 TP53RKQ96S44 253 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 PLEKHA2Q9HB19 425 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 KIAA1456Q9P272 454 aa17.37■□□□□ 0.37
C9orf3-222ENST00000496567 TRAV6A0A075B6T7 132 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 NBR2O15453 112 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 GPR137BO60478 399 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 PEX14O75381 377 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 SPDEFO95238 335 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 HRASP01112 189 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 H2AFB2P0C5Z0 115 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 ANXA3P12429 323 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 RPA2P15927 270 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 RPL15P61313 204 aaKnown RBP17.36■□□□□ 0.37
C9orf3-222ENST00000496567 DHODHQ02127 395 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 PLET1Q6UQ28 207 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 NPBQ8NG41 125 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 ALX4Q9H161 411 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-222ENST00000496567 COMMD9Q9P000 198 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 CUBNO60494 3623 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 FGF16O43320 207 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 OR5AC1P0C628 307 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 LPAR6P43657 344 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 F2RL1P55085 397 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 ZNF585BQ52M93 769 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 TMEM222Q9H0R3 208 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms