RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 OR2A4O95047 310 aa11.27□□□□□ -0.61
PTPRF-215ENST00000496447 VAX1Q5SQQ9 334 aa11.27□□□□□ -0.61
PTPRF-215ENST00000496447 OR2A7Q96R45 310 aa11.27□□□□□ -0.61
PTPRF-215ENST00000496447 FAM206AQ9NX38 181 aa11.27□□□□□ -0.61
PTPRF-215ENST00000496447 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM54Q969K7 222 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 AP5S1Q9NUS5 200 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 LOC390937A0A1W2PQ73 354 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 IGLV3-19P01714 112 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 PGA5P0DJD9 388 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 SLC35E4Q6ICL7 350 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 LRRC75AQ8NAA5 344 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 RAXQ9Y2V3 346 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 IGKV1D-42A0A075B6H8 117 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 SNRPCP09234 159 aaKnown RBP11.26□□□□□ -0.61
PTPRF-215ENST00000496447 MFAP4P55083 255 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 SAXO1Q8IYX7 474 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 DDB2Q92466 427 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 CHCHD2Q9Y6H1 151 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-215ENST00000496447 PXMP4Q9Y6I8 212 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 DSPPQ9NZW4 1301 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-215ENST00000496447 CYB561D1Q8N8Q1 229 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 FAM57AQ8TBR7 257 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 WFDC6Q9BQY6 131 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
PTPRF-215ENST00000496447 LINC00869P0C866 280 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 CD200R1LQ6Q8B3 271 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 JPT1Q9UK76 154 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM56-RWDD3S4R434 201 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 A0A0B4J293 547 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 RCC1P18754 421 aaPredicted RBP11.25□□□□□ -0.61
PTPRF-215ENST00000496447 SELENOTP62341 195 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 APCDD1LQ8NCL9 501 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 HIST1H1BP16401 226 aaKnown RBP11.25□□□□□ -0.61
PTPRF-215ENST00000496447 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 PTGDSP41222 190 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM45BQ96B21 275 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM186Q96B77 213 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 CEP290O15078 2479 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 BCL2P10415 239 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 CSRP1P21291 193 aaKnown RBP11.25□□□□□ -0.61
PTPRF-215ENST00000496447 OR52M1Q8NGK5 317 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM222Q9H0R3 208 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM140Q9NV12 185 aa11.25□□□□□ -0.61
PTPRF-215ENST00000496447 TGIF2-C20orf24A0A0A6YYL0 155 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 J3QW42 95 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 IGHMP01871 453 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 HOXA5P20719 270 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 MRPL30Q8TCC3 161 aaKnown RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 VWCEQ96DN2 955 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM204Q9BSN7 226 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 CGB1A6NKQ9 187 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 ISLRO14498 428 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 GLRXP35754 106 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 GLIPR1P48060 266 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 RND2P52198 227 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 NDUFAF3Q9BU61 184 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 GCM2O75603 506 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 CXorf66Q5JRM2 361 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 C17orf51A8MQB3 221 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 SNURFLB1AK76 121 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 UBE2CO00762 179 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 PGLYRP1O75594 196 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM30BQ3MIR4 351 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 RBKSQ9H477 322 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 NINQ8N4C6 2090 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 SVILO95425 2214 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 PLAUP00749 431 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 TNFSF10P50591 281 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 CLDN18P56856 261 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 AQP10Q96PS8 301 aa11.24□□□□□ -0.61
PTPRF-215ENST00000496447 ZNF430Q9H8G1 570 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 AKIRIN1Q9H9L7 192 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-215ENST00000496447 DNM1P46Q6ZS02 220 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 TRAV30A0A087WSZ9 112 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 FABP2P12104 132 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 TMEM106BQ9NUM4 274 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 MT-ND6P03923 174 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 FCGR2BP31994 310 aaPredicted RBP11.23□□□□□ -0.61
PTPRF-215ENST00000496447 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
PTPRF-215ENST00000496447 TWIST1Q15672 202 aa11.23□□□□□ -0.61
PTPRF-215ENST00000496447 OR4C13Q8NGP0 309 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms