RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 TMEM252Q8N6L7 170 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 SMIM8Q96KF7 97 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 CACNG5Q9UF02 275 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 PRELID3BQ9Y3B1 194 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 ANK3Q12955 4377 aaKnown RBP13.41□□□□□ -0.26
CBX4-204ENST00000495122 HIVEP2P31629 2446 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
CBX4-204ENST00000495122 TNFRSF13BO14836 293 aaPredicted RBP13.4□□□□□ -0.26
CBX4-204ENST00000495122 SYNGR2O43760 224 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 DFFBO76075 338 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 GYPAP02724 150 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 SOD3P08294 240 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 CAV2P51636 162 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 ATP5J2P56134 94 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 HOXA4Q00056 320 aaPredicted RBP13.4□□□□□ -0.26
CBX4-204ENST00000495122 RFESDQ8TAC1 157 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 TMED6Q8WW62 240 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 C5orf30Q96GV9 206 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 GPHA2Q96T91 129 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 CCL13Q99616 98 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 ABHD14AQ9BUJ0 271 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.4□□□□□ -0.26
CBX4-204ENST00000495122 CISD1Q9NZ45 108 aaKnown RBP13.4□□□□□ -0.26
CBX4-204ENST00000495122 KIAA2026Q5HYC2 2103 aa13.4□□□□□ -0.26
CBX4-204ENST00000495122 A0A0G2JRQ6 117 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 SHOXO15266 292 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 ST8SIA5O15466 376 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 CHST1O43916 411 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 HPRT1P00492 218 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 FAM157CP0CG43 387 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 DUTP33316 252 aaKnown RBP13.39□□□□□ -0.27
CBX4-204ENST00000495122 MST1LQ2TV78 715 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 AARDQ4LEZ3 155 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 FAM74A1Q5RGS3 127 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 PCNPQ8WW12 178 aaKnown RBP13.39□□□□□ -0.27
CBX4-204ENST00000495122 CIB3Q96Q77 187 aaPredicted RBP13.39□□□□□ -0.27
CBX4-204ENST00000495122 DCTN5Q9BTE1 182 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 IFI27L2Q9H2X8 130 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 PARP11Q9NR21 331 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 SLC25A10Q9UBX3 287 aaPredicted RBP13.39□□□□□ -0.27
CBX4-204ENST00000495122 HSPB7Q9UBY9 170 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 RPUSD1Q9UJJ7 312 aaKnown RBP13.39□□□□□ -0.27
CBX4-204ENST00000495122 RNF150Q9ULK6 438 aa13.39□□□□□ -0.27
CBX4-204ENST00000495122 STRAPQ9Y3F4 350 aaKnown RBP13.39□□□□□ -0.27
CBX4-204ENST00000495122 IGHV3-43A0A0B4J1X8 118 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 IGHV1-69-2A0A0G2JMI3 117 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 IGSF23A1L1A6 192 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 TXNL1O43396 289 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 NDUFB3O43676 98 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 IGHV3-43DP0DP04 118 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 SPP1P10451 314 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 DAOP14920 347 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 EPHA1P21709 976 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 THBS3P49746 956 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 SULT1A1P50225 295 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 RPL30P62888 115 aaKnown RBP13.38□□□□□ -0.27
CBX4-204ENST00000495122 FAM201AQ5SY85 155 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 COMMD1Q8N668 190 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 FAM216BQ8N7L0 139 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 ZNF439Q8NDP4 499 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 DEFB108BQ8NET1 73 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 GNPNAT1Q96EK6 184 aaPredicted RBP13.38□□□□□ -0.27
CBX4-204ENST00000495122 MMP26Q9NRE1 261 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 DSCAML1Q8TD84 2053 aa13.38□□□□□ -0.27
CBX4-204ENST00000495122 TRBV23-1A0A0A0MS06 115 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 FAM24AA6NFZ4 105 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 TRIM77I1YAP6 450 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 GPR37O15354 613 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 TMPRSS2O15393 492 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 CDKN1AP38936 164 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 MRPS11P82912 194 aaKnown RBP13.37□□□□□ -0.27
CBX4-204ENST00000495122 TAGLNQ01995 201 aaKnown RBP13.37□□□□□ -0.27
CBX4-204ENST00000495122 TNFRSF9Q07011 255 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 HFEQ30201 348 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 MUC15Q8N387 334 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 OR1S2Q8NGQ3 325 aa13.37□□□□□ -0.27
CBX4-204ENST00000495122 PARD6GQ9BYG4 376 aaPredicted RBP13.37□□□□□ -0.27
CBX4-204ENST00000495122 SONP18583 2426 aaKnown RBP13.37□□□□□ -0.27
CBX4-204ENST00000495122 C17orf98A8MV24 154 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 ZNF705EA8MWA4 302 aaPredicted RBP13.36□□□□□ -0.27
CBX4-204ENST00000495122 UMAD1C9J7I0 102 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 S1PR2O95136 353 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 PAX9P55771 341 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 HBG1P69891 147 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 HBG2P69892 147 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 NHLH2Q02577 135 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 KRTAP1-1Q07627 177 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 CLEC12BQ2HXU8 276 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 FAM71F2Q6NXP2 309 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 HEPN1Q6WQI6 88 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 Q6ZRM9 215 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 TCF23Q7RTU1 214 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 DTX2Q86UW9 622 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 OR4S2Q8NH73 311 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 CCL17Q92583 94 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms