RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RAC1P63000 192 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 RSPO1Q2MKA7 263 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 ACOT6Q3I5F7 207 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 SP6Q3SY56 376 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 ZNF672Q499Z4 452 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 CARD17Q5XLA6 110 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 FAM90A2PQ658T7 463 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 CLEC2AQ6UVW9 174 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 CYP2G1PQ6ZSU1 146 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 MOB1BQ7L9L4 216 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 CENPVQ7Z7K6 275 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 TBC1D26Q86UD7 250 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 CYB561D1Q8N8Q1 229 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 OR10D4PQ8NGN7 298 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 SCGB1C1Q8TD33 95 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 S100PBPQ96BU1 408 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 HDHD3Q9BSH5 251 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 SDF2L1Q9HCN8 221 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 Q9N2K0 584 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 GPR173Q9NS66 373 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 NAT8Q9UHE5 227 aa8.89□□□□□ -0.99
PDLIM1-205ENST00000493949 A0A1W2PNR3 127 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 TMEM89A2RUT3 159 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 FAM24AA6NFZ4 105 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 SLC22A20A6NK97 555 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 DEGS1O15121 323 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 SLC31A2O15432 143 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 SSSCA1O60232 199 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 RAMP1O60894 148 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 CBR3O75828 277 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 VENTXO95231 258 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 DBHP09172 617 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 GNRHRP30968 328 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 PDLIM4P50479 330 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 ERVFRD-1P60508 538 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 FGF12P61328 243 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 ZNF92Q03936 586 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 OR2T2Q6IF00 324 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 P4HA3Q7Z4N8 544 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 OR10A7Q8NGE5 316 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 AKR7LQ8NHP1 331 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 NPRL2Q8WTW4 380 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 BSCL2Q96G97 398 aaPredicted RBP8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 C14orf144Q96I85 54 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 RARRES2Q99969 163 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 PARP12Q9H0J9 701 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 ZNF442Q9H7R0 627 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 TMEM38BQ9NVV0 291 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 PROCRQ9UNN8 238 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 MRPS18CQ9Y3D5 142 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 ATP23Q9Y6H3 246 aa8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 KMT2CQ8NEZ4 4911 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-205ENST00000493949 HEATR1Q9H583 2144 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 H0YL77 283 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 ADAM20O43506 726 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 TYMSP04818 313 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 CXCL1P09341 107 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 USF1P22415 310 aaPredicted RBP8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 MDH2P40926 338 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 RAC3P60763 192 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 MSMO1Q15800 293 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 ATP6V1FQ16864 119 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 SNAI3Q3KNW1 292 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 ALKBH2Q6NS38 261 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 WFDC8Q8IUA0 241 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 MKXQ8IYA7 352 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 C10orf105Q8TEF2 133 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 FBXO17Q96EF6 278 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 IMMP2LQ96T52 175 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 CABLES2Q9BTV7 478 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 C1QTNF5Q9BXJ0 243 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 PLSCR4Q9NRQ2 329 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 GLRX2Q9NS18 164 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 ARFGEF3Q5TH69 2177 aa8.87□□□□□ -0.99
PDLIM1-205ENST00000493949 IGKV1-27A0A075B6S5 117 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 A0A087X0M5 115 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 A0A1B0GX30 115 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 ZNF814B7Z6K7 855 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 PHOX2AO14813 284 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 ZIC3O60481 467 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 TRGC2P03986 189 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 LCATP04180 440 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 CD3EP07766 207 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 METTL15P1P0C7V9 234 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 RAB4AP20338 218 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 F2RP25116 425 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 SRP14P37108 136 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 B3GALT5-AS1P59052 145 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 SPCS3P61009 180 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 LCN2P80188 198 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 HAGHQ16775 308 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
PDLIM1-205ENST00000493949 PLCXD3Q63HM9 321 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms