RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 UBE2G2P60604 165 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 CXCR4P61073 352 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 TBPL1P62380 186 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 HLA-DRB3P79483 266 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 RELAQ04206 551 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 PLPPR5Q32ZL2 321 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 ZNF791Q3KP31 576 aaPredicted RBP1.07□□□□□ -2.24
SMC4-223ENST00000493695 OR10K2Q6IF99 312 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 BAP18Q8IXM2 172 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 DAND5Q8N907 189 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
SMC4-223ENST00000493695 TMSB15BA0A087X1C1 80 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 SIGLEC16A6NMB1 481 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 C9JCJ5 164 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 J3QQQ9 107 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 IL6P05231 212 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 IFNGR2P38484 337 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 RPL27AP46776 148 aaKnown RBP1.06□□□□□ -2.24
SMC4-223ENST00000493695 GABRA2P47869 451 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 HINT1P49773 126 aaPredicted RBP1.06□□□□□ -2.24
SMC4-223ENST00000493695 RPL26P61254 145 aaKnown RBP1.06□□□□□ -2.24
SMC4-223ENST00000493695 UAP1Q16222 522 aaPredicted RBP1.06□□□□□ -2.24
SMC4-223ENST00000493695 HSP90B2PQ58FF3 399 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 GPHB5Q86YW7 130 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 FUNDC1Q8IVP5 155 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 DEFB119Q8N690 84 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 OR5J2Q8NH18 312 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 ASB17Q8WXJ9 295 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 SFRP2Q96HF1 295 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 DHRS9Q9BPW9 319 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 TIPINQ9BVW5 301 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 RPL26L1Q9UNX3 145 aaKnown RBP1.06□□□□□ -2.24
SMC4-223ENST00000493695 HHLA3Q9XRX5 114 aa1.06□□□□□ -2.24
SMC4-223ENST00000493695 POLR3HQ9Y535 204 aaPredicted RBP1.06□□□□□ -2.24
SMC4-223ENST00000493695 IGHV3-64A0A075B6Q5 118 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 TMED7-TICAM2A0A0A6YYA0 188 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 TRAV41A0A0B4J266 112 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 A0A1B0GVG6 124 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 C5orf49A4QMS7 147 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 UBE2L6O14933 153 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 APOMO95445 188 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 HLA-DRAP01903 254 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 PLEKHG7Q6ZR37 379 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 Q8N402 240 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 C7orf50Q9BRJ6 194 aaKnown RBP1.05□□□□□ -2.24
SMC4-223ENST00000493695 DERL2Q9GZP9 239 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 HES4Q9HCC6 221 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 PLEKHJ1Q9NW61 149 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 PIK3R4Q99570 1358 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 FN1P02751 2386 aaKnown RBP1.05□□□□□ -2.24
SMC4-223ENST00000493695 GRIN2BQ13224 1484 aa1.05□□□□□ -2.24
SMC4-223ENST00000493695 TENM3Q9P273 2699 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 SIPA1L1O43166 1804 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 A8MUN3 132 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 F5H768 121 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 COCHO43405 550 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 C1QCP02747 245 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 GPX1P07203 203 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 BPGMP07738 259 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 ZNF705DP0CH99 300 aaPredicted RBP1.04□□□□□ -2.24
SMC4-223ENST00000493695 ZNF705BP0CI00 300 aaPredicted RBP1.04□□□□□ -2.24
SMC4-223ENST00000493695 DDTP30046 118 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 RAP1GDS1P52306 607 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 EMP2P54851 167 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 CTBP2P56545 445 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 SKP1P63208 163 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 ERHP84090 104 aaKnown RBP1.04□□□□□ -2.24
SMC4-223ENST00000493695 MED21Q13503 144 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 JOSD1Q15040 202 aaPredicted RBP1.04□□□□□ -2.24
SMC4-223ENST00000493695 PDPK2PQ6A1A2 396 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 SLC35E3Q7Z769 313 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 TMEM251Q8N6I4 163 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 ZNF675Q8TD23 568 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 KCTD7Q96MP8 289 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 CCL13Q99616 98 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 DCUN1D5Q9BTE7 237 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 TMEM109Q9BVC6 243 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 CFAP45Q9UL16 551 aa1.04□□□□□ -2.24
SMC4-223ENST00000493695 RP1L1Q8IWN7 2480 aaPredicted RBP1.03□□□□□ -2.24
SMC4-223ENST00000493695 A0A1B0GW54 56 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 NAPSAO96009 420 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 C8orf88P0DMB2 117 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 UGT2B7P16662 529 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 MIAQ16674 131 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 SBSNQ6UWP8 590 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 Q6ZSA8 131 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 JOSD2Q8TAC2 188 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 HAVCR2Q8TDQ0 301 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 ANKRD36BP1Q96IX9 119 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 CYSTM1Q9H1C7 97 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 VCX3BQ9H321 246 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 BABAM2Q9NXR7 383 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 DOK5Q9P104 306 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 TAAR3PQ9P1P4 343 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 KIF15Q9NS87 1388 aa1.03□□□□□ -2.24
SMC4-223ENST00000493695 RFPL4AA6NLU0 287 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 GOLGA8KD6RF30 607 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 RFPL4AL1F8VTS6 287 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 GOLGA8MH3BSY2 632 aa1.02□□□□□ -2.25
SMC4-223ENST00000493695 HLA-DQB2P05538 268 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms