RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZNF506Q5JVG8 444 aa17.27■□□□□ 0.35
RNF40-203ENST00000493683 ARL17AQ8IVW1 177 aa17.27■□□□□ 0.35
RNF40-203ENST00000493683 OR52M1Q8NGK5 317 aa17.27■□□□□ 0.35
RNF40-203ENST00000493683 OR4C13Q8NGP0 309 aa17.27■□□□□ 0.35
RNF40-203ENST00000493683 CTHRC1Q96CG8 243 aa17.27■□□□□ 0.35
RNF40-203ENST00000493683 NPIPB9F8W1W9 429 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 C2orf83Q53S99 150 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 LINC00518Q8N0U6 118 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 LOC102724200A0A096LPH7 203 aaPredicted RBP17.26■□□□□ 0.35
RNF40-203ENST00000493683 SCGB1A1P11684 91 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 C2orf68Q2NKX9 166 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 PCSK4Q6UW60 755 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 OR9G1Q8NH87 305 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 PQLC2LA1A4F0 135 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 TSPOP30536 169 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 PGLYRP4Q96LB8 373 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 GGACTQ9BVM4 153 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 PARD6GQ9BYG4 376 aaPredicted RBP17.26■□□□□ 0.35
RNF40-203ENST00000493683 TRBV23-1A0A0A0MS06 115 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 CLEC2AQ6UVW9 174 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 TCF19Q9Y242 345 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 PHLDA3Q9Y5J5 127 aa17.26■□□□□ 0.35
RNF40-203ENST00000493683 LCN2P80188 198 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 FAM209BQ5JX69 171 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 SRIP30626 198 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 SSTR5P35346 364 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 LAMTOR1Q6IAA8 161 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 SFRP2Q96HF1 295 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 PARLQ9H300 379 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 CTSSP25774 331 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 SLC22A18ASQ8N1D0 253 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 OPN3Q9H1Y3 402 aaPredicted RBP17.25■□□□□ 0.35
RNF40-203ENST00000493683 CX3CL1P78423 397 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 IFITM2Q01629 132 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 DDB2Q92466 427 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 HIST1H2BAQ96A08 127 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 FAM106AQ4KMX7 169 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 LINC01590Q5TEZ4 76 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 AUP1Q9Y679 476 aa17.25■□□□□ 0.35
RNF40-203ENST00000493683 SAPCD1Q5SSQ6 148 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 HCP5Q6MZN7 132 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 UNQ5815/PRO19632Q6UWF5 114 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 TMEM136Q6ZRR5 245 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 TMEM54Q969K7 222 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 LPAR2Q9HBW0 351 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 RRN3P1Q2M238 152 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 APC2O95996 2303 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 ZG16O60844 167 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 C1QCP02747 245 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 SNAI3Q3KNW1 292 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 RARRES2Q99969 163 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 PATE3B3GLJ2 98 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 UQCRFS1P47985 274 aa17.24■□□□□ 0.35
RNF40-203ENST00000493683 GP6Q9HCN6 339 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 TMEM183AQ8IXX5 376 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 OR11H4Q8NGC9 324 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 SRSF12Q8WXF0 261 aaKnown RBP17.23■□□□□ 0.35
RNF40-203ENST00000493683 CARHSP1Q9Y2V2 147 aaKnown RBP17.23■□□□□ 0.35
RNF40-203ENST00000493683 IGKV1D-42A0A075B6H8 117 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 FCGR2BP31994 310 aaPredicted RBP17.23■□□□□ 0.35
RNF40-203ENST00000493683 RELQ04864 619 aaPredicted RBP17.23■□□□□ 0.35
RNF40-203ENST00000493683 MUC15Q8N387 334 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 MOB4Q9Y3A3 225 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 HILPDAQ9Y5L2 63 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 FOCADQ5VW36 1801 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 FBLL1A6NHQ2 334 aaKnown RBP17.23■□□□□ 0.35
RNF40-203ENST00000493683 LINC00470Q9BZP3 86 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 RAXQ9Y2V3 346 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
RNF40-203ENST00000493683 LIPFP07098 398 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 ZCCHC14Q8WYQ9 949 aaKnown RBP17.22■□□□□ 0.35
RNF40-203ENST00000493683 RAX2Q96IS3 184 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 hCG_38984A0A1B0GV85 526 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 CRYBB3P26998 211 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 PRSS53Q2L4Q9 553 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 NABP2Q9BQ15 211 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 GCHFRP30047 84 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 CSRP3P50461 194 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 ZNF818PQ6ZRF7 136 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 TRPM6Q9BX84 2022 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 TRAV9-1A0A075B6T8 112 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 GDF9O60383 454 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 LMX1BO60663 402 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 HBBP68871 147 aa17.22■□□□□ 0.35
RNF40-203ENST00000493683 SLC25A17O43808 307 aa17.21■□□□□ 0.35
RNF40-203ENST00000493683 PF4V1P10720 104 aa17.21■□□□□ 0.35
RNF40-203ENST00000493683 WNT5BQ9H1J7 359 aa17.21■□□□□ 0.35
RNF40-203ENST00000493683 STPG1Q5TH74 334 aa17.21■□□□□ 0.35
RNF40-203ENST00000493683 EIF3GO75821 320 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF40-203ENST00000493683 ZNF708P17019 499 aa17.21■□□□□ 0.35
RNF40-203ENST00000493683 PRSS8Q16651 343 aa17.21■□□□□ 0.35
RNF40-203ENST00000493683 KLF14Q8TD94 323 aaPredicted RBP17.21■□□□□ 0.35
RNF40-203ENST00000493683 SOX21Q9Y651 276 aaPredicted RBP17.21■□□□□ 0.35
RNF40-203ENST00000493683 LEMD1Q68G75 181 aa17.2■□□□□ 0.34
RNF40-203ENST00000493683 ZNF826PQ6ZT77 177 aa17.2■□□□□ 0.34
RNF40-203ENST00000493683 SCARF2Q96GP6 870 aaPredicted RBP17.2■□□□□ 0.34
RNF40-203ENST00000493683 KIR2DL4Q99706 377 aa17.2■□□□□ 0.34
RNF40-203ENST00000493683 SH3BGRL3Q9H299 93 aa17.2■□□□□ 0.34
RNF40-203ENST00000493683 PPP1R17O96001 155 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms