RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 FAM90A22PA8MWA6 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A12PA8MX19 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A5PA8MXJ8 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A23PA8MXZ1 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 TRAPPC2LH3BP13 241 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 TIAF1O95411 115 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A15PP0C7V4 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A13PP0C7W8 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A14PP0C7W9 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A24PP0C7X0 464 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 SMIM15Q7Z3B0 74 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 GCNT2Q8N0V5 402 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 OR2M7Q8NG81 312 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 GMPPAQ96IJ6 420 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-210ENST00000493582 KCNS1Q96KK3 526 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 MRPS16Q9Y3D3 137 aaKnown RBP9.83□□□□□ -0.84
HDAC4-210ENST00000493582 PIGBOS1A0A0B4J2F0 54 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 MMP23AO75900 390 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 CCL2P13500 99 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 RAC1P63000 192 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF816Q0VGE8 651 aaPredicted RBP9.83□□□□□ -0.84
HDAC4-210ENST00000493582 CLEC7AQ9BXN2 247 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 CST9LQ9H4G1 147 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 TMEM38BQ9NVV0 291 aa9.83□□□□□ -0.84
HDAC4-210ENST00000493582 TRAV24A0A0B4J272 114 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 RRHO14718 337 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF324O75467 553 aaPredicted RBP9.82□□□□□ -0.84
HDAC4-210ENST00000493582 RBMXL2O75526 392 aaKnown RBP9.82□□□□□ -0.84
HDAC4-210ENST00000493582 CA2P00918 260 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 RPL31P62899 125 aaKnown RBP9.82□□□□□ -0.84
HDAC4-210ENST00000493582 RELBQ01201 579 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 OCIAD2Q56VL3 154 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 KIAA0895LQ68EN5 471 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 MKXQ8IYA7 352 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 Q8N7P7 452 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 SFXN3Q9BWM7 321 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 OR2H1Q9GZK4 316 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 LIN7CQ9NUP9 197 aaKnown RBP9.82□□□□□ -0.84
HDAC4-210ENST00000493582 IGHV2-26A0A0B4J1V2 119 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 FAM166BA8MTA8 275 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 PSG1P11464 419 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 SRIP30626 198 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 SLC23A3Q6PIS1 610 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 WDR74Q6RFH5 385 aaPredicted RBP9.82□□□□□ -0.84
HDAC4-210ENST00000493582 DRAM1Q8N682 238 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 CHRNA10Q9GZZ6 450 aa9.82□□□□□ -0.84
HDAC4-210ENST00000493582 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 ODAMA1E959 279 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 PRSS47A8MTI9 375 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 C17orf112F2Z3M2 114 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 CLDN14O95500 239 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 TCL1AP56279 114 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 RPEL1Q2QD12 228 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 BORCS7Q96B45 105 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 CFHR5Q9BXR6 569 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 YTHDF2Q9Y5A9 579 aaKnown RBP9.81□□□□□ -0.84
HDAC4-210ENST00000493582 COL6A3P12111 3177 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 A0A1W2PRS3 328 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 FAM90A26D6RGX4 464 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 VAMP5O95183 116 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 STUMQ69YW2 141 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 VASH2Q86V25 355 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 C7orf61Q8IZ16 206 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 GNB1LQ9BYB4 327 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 SRXN1Q9BYN0 137 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 FRYLO94915 3013 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 TRAV30A0A087WSZ9 112 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 IGHV1-69-2A0A0G2JMI3 117 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 A0A0J9YW62 118 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 LRRC30A6NM36 301 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-210ENST00000493582 S1PR2O95136 353 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 IGHV3-9P01782 118 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 TMEM11P17152 192 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 CEACAM16Q2WEN9 425 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 FADS6Q8N9I5 356 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 ST6GALNAC6Q969X2 333 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 SPACA9Q96E40 222 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-210ENST00000493582 CSTL1Q9H114 145 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 ZNF391Q9UJN7 358 aa9.81□□□□□ -0.84
HDAC4-210ENST00000493582 ZFAND5O76080 213 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 IGLL1P15814 213 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 OTX2P32243 289 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 RPL19P84098 196 aaKnown RBP9.8□□□□□ -0.84
HDAC4-210ENST00000493582 Q56UQ5 140 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 FAM53AQ6NSI3 398 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-210ENST00000493582 FXYD3Q14802 87 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 KRTAP27-1Q3LI81 207 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 FOXB1Q99853 325 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 C19orf25Q9UFG5 118 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-210ENST00000493582 CD207Q9UJ71 328 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 CHCHD2Q9Y6H1 151 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-210ENST00000493582 V9GYV3 84 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 CELSR3Q9NYQ7 3312 aa9.8□□□□□ -0.84
HDAC4-210ENST00000493582 GLB1P16278 677 aa9.79□□□□□ -0.84
HDAC4-210ENST00000493582 OR10J3Q5JRS4 329 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms