RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 H7C2Y5 167 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 TIMM23O14925 209 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 FCGR3BO75015 233 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 IGHV4-59P01825 116 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 MDKP21741 143 aaPredicted RBP10.79□□□□□ -0.68
MSH6-208ENST00000493177 VAMP1P23763 118 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 RAG2P55895 527 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 CBX3Q13185 183 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 EIF4EBP1Q13541 118 aaPredicted RBP10.79□□□□□ -0.68
MSH6-208ENST00000493177 C4orf46Q504U0 113 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 SHISA2Q6UWI4 295 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 SLC25A42Q86VD7 318 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 ZNF383Q8NA42 475 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 OR4F5Q8NH21 305 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 SGMS2Q8NHU3 365 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 CAPSLQ8WWF8 208 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 TMEM230Q96A57 120 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 AJUBAQ96IF1 538 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 SLC35D1Q9NTN3 355 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 LIN7CQ9NUP9 197 aaKnown RBP10.79□□□□□ -0.68
MSH6-208ENST00000493177 KCNIP3Q9Y2W7 256 aa10.79□□□□□ -0.68
MSH6-208ENST00000493177 C3orf85A0A1B0GTC6 90 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 CRYM-AS1A6NIL9 109 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 H0YJW9 148 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 PEX14O75381 377 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 DHFRP00374 187 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 ANXA3P12429 323 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 F2RP25116 425 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 BRS3P32247 399 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 KIR2DS2P43631 304 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 IER3P46695 156 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 HES1Q14469 280 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 OXA1LQ15070 435 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 RTL8BQ17RB0 113 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 SP6Q3SY56 376 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 TMEM128Q5BJH2 165 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 SPAG16Q8N0X2 631 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 MINDY2Q8NBR6 621 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 ZNF747Q9BV97 191 aa10.78□□□□□ -0.68
MSH6-208ENST00000493177 A0A1B0GUS0 222 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 GPR137BO60478 399 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 OR5AC1P0C628 307 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 OR4E1P0C645 316 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 VSIG10L2P0DP72 767 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 RRASP10301 218 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 CD24P25063 80 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 MC5RP33032 325 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 RAB13P51153 203 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 UBE2MP61081 183 aaKnown RBP10.77□□□□□ -0.69
MSH6-208ENST00000493177 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
MSH6-208ENST00000493177 PPP1R1AQ13522 171 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 DHRS7BQ6IAN0 325 aaPredicted RBP10.77□□□□□ -0.69
MSH6-208ENST00000493177 CASTOR1Q8WTX7 329 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 CHPT1Q8WUD6 406 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 MARVELD1Q9BSK0 173 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 MEGF9Q9H1U4 602 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 WASHC3Q9Y3C0 194 aa10.77□□□□□ -0.69
MSH6-208ENST00000493177 H0Y980 276 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 SFT2D2O95562 160 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 CRYZL1O95825 349 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 IGKV1D-33P01593 117 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 IGKV1-33P01594 117 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 HLA-AP01891 365 aaKnown RBP10.76□□□□□ -0.69
MSH6-208ENST00000493177 SERPINE2P07093 398 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 SNRNP70P08621 437 aaKnown RBP10.76□□□□□ -0.69
MSH6-208ENST00000493177 CD1BP29016 333 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 LPAR6P43657 344 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 RPL15P61313 204 aaKnown RBP10.76□□□□□ -0.69
MSH6-208ENST00000493177 DHODHQ02127 395 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 HNF4GQ14541 408 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 LRRC75BQ2VPJ9 315 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 PDPNQ86YL7 162 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 OR5AN1Q8NGI8 311 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 OR4S2Q8NH73 311 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 OR5R1Q8NH85 324 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 DDB2Q92466 427 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 CFHR4Q92496 578 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 RBMXL1Q96E39 390 aaKnown RBP10.76□□□□□ -0.69
MSH6-208ENST00000493177 TP53RKQ96S44 253 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 SSX3Q99909 188 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 GPN1Q9HCN4 374 aaPredicted RBP10.76□□□□□ -0.69
MSH6-208ENST00000493177 C1RLQ9NZP8 487 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 VPREB3Q9UKI3 123 aa10.76□□□□□ -0.69
MSH6-208ENST00000493177 C9orf170A2RU37 121 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 H3BUX3 64 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 PRAF2O60831 178 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 RAMP3O60896 148 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 B3GALNT1O75752 331 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 FAM106CPP0CH98 169 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 RPS16P62249 146 aaKnown RBP10.75□□□□□ -0.69
MSH6-208ENST00000493177 SUPT4H1P63272 117 aaKnown RBP10.75□□□□□ -0.69
MSH6-208ENST00000493177 DHRS2Q13268 280 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 LYG2Q86SG7 212 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 TCTEX1D1Q8N7M0 179 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 OR52B4Q8NGK2 314 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 OR2T10Q8NGZ9 312 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 FLYWCH2Q96CP2 140 aaKnown RBP10.75□□□□□ -0.69
MSH6-208ENST00000493177 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms