RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CLDND2Q8NHS1 167 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 TMEM133Q9H2Q1 129 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 TRBV23-1A0A0A0MS06 115 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 KIAA1324LA8MWY0 1029 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-219ENST00000491128 F5H0A9 414 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-219ENST00000491128 PLA2G2AP14555 144 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 MYOD1P15172 320 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 RPL12P30050 165 aaKnown RBP11.34□□□□□ -0.59
SMPD4-219ENST00000491128 KCNRGQ8N5I3 272 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 R3HDM4Q96D70 268 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 IGHV2-26A0A0B4J1V2 119 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 TOR2AQ5JU69 321 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 DDB2Q92466 427 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 H7C2Y5 167 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 ZNF787Q6DD87 383 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 TMEM217Q8N7C4 229 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 LPAR3Q9UBY5 353 aa11.33□□□□□ -0.6
SMPD4-219ENST00000491128 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 SRRM4A7MD48 611 aaKnown RBP11.32□□□□□ -0.6
SMPD4-219ENST00000491128 TEX46H3BTG2 121 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 PITX3O75364 302 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 SCO1O75880 301 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 CST7O76096 145 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 IGHV2-5P01817 119 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 OPN1MWP04001 364 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 LIPFP07098 398 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 PET100P0DJ07 73 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 OPN1MW2P0DN77 364 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 OPN1MW3P0DN78 364 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 ID3Q02535 119 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 SLC51BQ86UW2 128 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 RITA1Q96K30 269 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 PRELID3BQ9Y3B1 194 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 SESN1Q9Y6P5 492 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 FASNP49327 2511 aaKnown RBP11.32□□□□□ -0.6
SMPD4-219ENST00000491128 IGHV4-30-2A0A087WSY4 118 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 IGHV4-61A0A0C4DH41 118 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 TOR1AO14656 332 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 LYL1P12980 280 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 LMO4P61968 165 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 OR2F1Q13607 317 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
SMPD4-219ENST00000491128 A0A1B0GU03 582 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 FSTL3O95633 263 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 LY6G5BQ8NDX9 201 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 FAM168AQ92567 244 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
SMPD4-219ENST00000491128 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 PCGF1Q9BSM1 259 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
SMPD4-219ENST00000491128 A0A0D9SG52 128 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 IGSF23A1L1A6 192 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 CLEC18AA5D8T8 446 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 FAM157AC9JC47 383 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 CD24P25063 80 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 NUP62P37198 522 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-219ENST00000491128 PAX9P55771 341 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 TMEM267Q0VDI3 215 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-219ENST00000491128 RPL7L1Q6DKI1 246 aaKnown RBP11.31□□□□□ -0.6
SMPD4-219ENST00000491128 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 CLEC18CQ8NCF0 446 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
SMPD4-219ENST00000491128 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 E5RGE8 158 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 ITGB1BP1O14713 200 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 BCL2L11O43521 198 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 B3GALNT1O75752 331 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 HPRT1P00492 218 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 CLINT1Q14677 625 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 MIDNQ504T8 468 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 RHOVQ96L33 236 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 HILPDAQ9Y5L2 63 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 RFNGQ9Y644 331 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 ENSAO43768 121 aaKnown RBP11.3□□□□□ -0.6
SMPD4-219ENST00000491128 P0C879 139 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 PDLIM4P50479 330 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 VAMP2P63027 116 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 ZNF345Q14585 488 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 AQP10Q96PS8 301 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 CYTL1Q9NRR1 136 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
SMPD4-219ENST00000491128 J3QKU1 62 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms