RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 TNRC6AQ8NDV7 1962 aaKnown RBP16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 SIAH2O43255 324 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 SYNGR4O95473 234 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 KRASP01116 189 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 CRISP2P16562 243 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 KITLGP21583 273 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 CBLN1P23435 193 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 YRDCQ86U90 279 aaKnown RBP16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 GGNQ86UU5 652 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 FAM58AQ8N1B3 248 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 OR5AU1Q8NGC0 362 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 WDR54Q9H977 334 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 ZNF292O60281 2723 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 IGHV3-9P01782 118 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 COX6A1P12074 109 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 FOXJ2Q9P0K8 574 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 ZFP30Q9Y2G7 519 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 ZFHX4Q86UP3 3567 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 CFAP47Q6ZTR5 3102 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 MUC6Q6W4X9 2439 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 TRBV20OR9-2A0A075B6H5 130 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 IGHV1-45A0A0A0MS14 117 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 C9orf172C9J069 976 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 C17orf112F2Z3M2 114 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 COMPP49747 757 aaPredicted RBP16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 VWC2Q2TAL6 325 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 DTD1Q8TEA8 209 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 SH2D2AQ9NP31 389 aa16.24■□□□□ 0.19
SNAPC3-206ENST00000490969 RAB7AP51149 207 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 SSR4P51571 173 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 DCAF12Q5T6F0 453 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 IMMP1LQ96LU5 166 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 LOC102723996A0A087X1L8 192 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 C5orf49A4QMS7 147 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 LRRC30A6NM36 301 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 RNF212BA8MTL3 300 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 TCF21O43680 179 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 ZG16O60844 167 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 RAMP3O60896 148 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 G6PCP35575 357 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 C11orf42Q8N5U0 333 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 OR2Y1Q8NGV0 311 aa16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 MRPL18Q9H0U6 180 aaKnown RBP16.23■□□□□ 0.19
SNAPC3-206ENST00000490969 ANKRD39Q53RE8 183 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 MOB1BQ7L9L4 216 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 DOCK10Q96BY6 2186 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 DNAJC4Q9NNZ3 241 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 TRAV38-1A0A0B4J264 116 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 ODAMA1E959 279 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 P0C879 139 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 TIMP3P35625 211 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 GCSAMLQ5JQS6 135 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 OR10G8Q8NGN5 311 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 ZDHHC16Q969W1 377 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 SAMD10Q9BYL1 202 aa16.22■□□□□ 0.19
SNAPC3-206ENST00000490969 CHRNB4P30926 498 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 ZNF90Q03938 601 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 TMEM249Q2WGJ8 235 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 FBXW9Q5XUX1 488 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 BAGE3Q86Y29 109 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 BAGE2Q86Y30 109 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 OR10D3Q8NH80 312 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 KCNE4Q8WWG9 221 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 TRAPPC2LQ9UL33 140 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 WIPI2Q9Y4P8 454 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 YLPM1P49750 1951 aaKnown RBP16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 ABHD3Q8WU67 409 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 CT55Q8WUE5 264 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 APOBEC3DQ96AK3 386 aaPredicted RBP16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 ASCL3Q9NQ33 180 aa16.21■□□□□ 0.19
SNAPC3-206ENST00000490969 F2Z2F3 143 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 HNF1AP20823 631 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 Q8N7P7 452 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 OR4B1Q8NGF8 309 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 SPRY4Q9C004 299 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 CHODLQ9H9P2 273 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 CUL9Q8IWT3 2517 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 TRAPPC6AO75865 159 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 SRD5A2P31213 254 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 THBS3P49746 956 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 ZNF816Q0VGE8 651 aaPredicted RBP16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 TRIP6Q15654 476 aaKnown RBP16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 Q6P435 159 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 RAB1CQ92928 201 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 SLC35E1Q96K37 410 aa16.2■□□□□ 0.18
SNAPC3-206ENST00000490969 MED13Q9UHV7 2174 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 A0A096LPE4 126 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 A0A1W2PPZ6 126 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 NGFP01138 241 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 Q0VFX4 171 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 C9orf135Q5VTT2 229 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 OCC1Q8TAD7 63 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 CIB3Q96Q77 187 aaPredicted RBP16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 MSL2Q9HCI7 577 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 FBXL7Q9UJT9 491 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 TRAV9-1A0A075B6T8 112 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 A0A0G2JMM0 328 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 A0A1W2PPB8 328 aa16.19■□□□□ 0.18
SNAPC3-206ENST00000490969 A0A1W2PRS3 328 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms